RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 BAG2O95816 211 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 PSAPP07602 524 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 CYP3A4P08684 503 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 VIL1P09327 827 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 RAD23BP54727 409 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 MTMR2Q13614 643 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 ITIH4Q14624 930 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 STAT4Q14765 748 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 ACCSLQ4AC99 568 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 KCNT1Q5JUK3 1230 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 SWT1Q5T5J6 900 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 SNRNP48Q6IEG0 339 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 BTNL9Q6UXG8 535 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 ZC3H18Q86VM9 953 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 SIAH1Q8IUQ4 282 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 RBBP8NLQ8NC74 664 aaPredicted RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 PPFIBP2Q8ND30 876 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 MCPH1Q8NEM0 835 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 CCT6BQ92526 530 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 NUDCD1Q96RS6 583 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 IDI2Q9BXS1 227 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 TRIM6Q9C030 488 aaPredicted RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 INO80BQ9C086 356 aaPredicted RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 MTFR1LQ9H019 292 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 ATP6V0A4Q9HBG4 840 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 ZDHHC18Q9NUE0 388 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 GRHL1Q9NZI5 618 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 PCYOX1Q9UHG3 505 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 CNOT7Q9UIV1 285 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 R3HDM2Q9Y2K5 976 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 SCINQ9Y6U3 715 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 GLI3P10071 1580 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 CACNA1SQ13698 1873 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 F5H423 210 aaPredicted RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 RGL2O15211 777 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 ATP9AO75110 1047 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 RNF8O76064 485 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 MAP3K6O95382 1288 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 WEE2P0C1S8 567 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 ETS1P14921 441 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 DESP17661 470 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 IGBP1P78318 339 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 CAV1Q03135 178 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 NFX1Q12986 1120 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 UGCGQ16739 394 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 HADHQ16836 314 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 CYP4A22Q5TCH4 519 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 PAXIP1Q6ZW49 1069 aaPredicted RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 FAM71AQ8IYT1 594 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 DAW1Q8N136 415 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 PDIK1LQ8N165 341 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 KCTD6Q8NC69 237 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 AGAP11Q8TF27 550 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 TLCD1Q96CP7 247 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 CFAP36Q96G28 342 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 TMEM121Q9BTD3 319 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 YIPF3Q9GZM5 350 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 KIF9Q9HAQ2 790 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 SLCO1B3Q9NPD5 702 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 UBN1Q9NPG3 1134 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 GEMIN8Q9NWZ8 242 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 NINJ2Q9NZG7 142 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 ZFP69BQ9UJL9 534 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 A8MUI8 341 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 I3L4J1 428 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 RASSF9O75901 435 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 NR3C2P08235 984 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 KITP10721 976 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 CALRP27797 417 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 CCND2P30279 289 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 GTF2H1P32780 548 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 SLC1A1P43005 524 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 PSMC4P43686 418 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 DRG2P55039 364 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 PRKCEQ02156 737 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 ORC1Q13415 861 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 HIF1AQ16665 826 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 SLC27A3Q5K4L6 730 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 FAM182AQ5T1J6 154 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 MCOLN2Q8IZK6 566 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 PDCD7Q8N8D1 485 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 TMEM35BQ8NCS4 154 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 C1orf131Q8NDD1 294 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 CFAP61Q8NHU2 1237 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 DTX3LQ8TDB6 740 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 SHC3Q92529 594 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 RBM41Q96IZ5 413 aaKnown RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 NLRP4Q96MN2 994 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 PAGR1Q9BTK6 254 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 DCLK3Q9C098 648 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 RPAP3Q9H6T3 665 aaPredicted RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 WHRNQ9P202 907 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 SAE1Q9UBE0 346 aaPredicted RBP5.02□□□□□ -1.61
USP44-201ENST00000258499 PLIN4Q96Q06 1357 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 CHD4Q14839 1912 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 ROBO1Q9Y6N7 1651 aa5.02□□□□□ -1.61
USP44-201ENST00000258499 CCDC195A0A1B0GUA6 201 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 ICAM1P05362 532 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 MYBL1P10243 752 aa5.01□□□□□ -1.61
USP44-201ENST00000258499 KRT4P19013 534 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms