RNA–Protein interactions for RNA: ENST00000249007.4

RFPL3-201, Transcript of ret finger protein like 3, humanhuman

TSL 1 (best) BASIC

Gene RFPL3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL3-201ENST00000249007 MOSPD3O75425 235 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 ABLIM3O94929 683 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 SEC24BO95487 1268 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 MYL4P12829 197 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 ATF2P15336 505 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 CDC27P30260 824 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 NAB2Q15742 525 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 COL28A1Q2UY09 1125 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 UAP1L1Q3KQV9 507 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 Q4G0T1 1027 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 SLC8B1Q6J4K2 584 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 LEMD2Q8NC56 503 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 ZNF462Q96JM2 2506 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 MTRQ99707 1265 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 GPR88Q9GZN0 384 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 ASAH2Q9NR71 780 aa13.23□□□□□ -0.29
RFPL3-201ENST00000249007 WRAP73Q9P2S5 460 aaPredicted RBP13.23□□□□□ -0.29
RFPL3-201ENST00000249007 UNC79Q9P2D8 2635 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 HECTD1Q9ULT8 2610 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 TMEM189-UBE2V1I3L0A0 370 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 EML1O00423 815 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 SLC27A2O14975 620 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 TRAPPC3O43617 180 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 ATG13O75143 517 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 TDP2O95551 362 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 PRKCBP05771 671 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 ARPP19P56211 112 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 IRX6P78412 446 aaPredicted RBP13.22□□□□□ -0.29
RFPL3-201ENST00000249007 POU5F1BQ06416 359 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 TEAD2Q15562 447 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 TTC22Q5TAA0 569 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 CAMKK1Q8N5S9 505 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 ETNPPLQ8TBG4 499 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 ZNF512Q96ME7 567 aaPredicted RBP13.22□□□□□ -0.29
RFPL3-201ENST00000249007 MKNK1Q9BUB5 465 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 SLC32A1Q9H598 525 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 SNTG2Q9NY99 539 aa13.22□□□□□ -0.29
RFPL3-201ENST00000249007 I3L4J1 428 aa13.21□□□□□ -0.3
RFPL3-201ENST00000249007 DCLK1O15075 740 aa13.21□□□□□ -0.3
RFPL3-201ENST00000249007 SEC24AO95486 1093 aa13.21□□□□□ -0.3
RFPL3-201ENST00000249007 IGFBP6P24592 240 aaPredicted RBP13.21□□□□□ -0.3
RFPL3-201ENST00000249007 YWHABP31946 246 aaKnown RBP13.21□□□□□ -0.3
RFPL3-201ENST00000249007 GBP1P32455 592 aa13.21□□□□□ -0.3
RFPL3-201ENST00000249007 CAPSQ13938 189 aa13.21□□□□□ -0.3
RFPL3-201ENST00000249007 KARSQ15046 597 aaKnown RBP13.21□□□□□ -0.3
RFPL3-201ENST00000249007 XKR9Q5GH70 373 aa13.21□□□□□ -0.3
RFPL3-201ENST00000249007 OTUD6AQ7L8S5 288 aa13.21□□□□□ -0.3
RFPL3-201ENST00000249007 HAUS6Q7Z4H7 955 aa13.21□□□□□ -0.3
RFPL3-201ENST00000249007 TBCKQ8TEA7 893 aa13.21□□□□□ -0.3
RFPL3-201ENST00000249007 ZFYVE19Q96K21 471 aa13.21□□□□□ -0.3
RFPL3-201ENST00000249007 NAP1L5Q96NT1 182 aaPredicted RBP13.21□□□□□ -0.3
RFPL3-201ENST00000249007 BBC3Q96PG8 261 aaPredicted RBP13.21□□□□□ -0.3
RFPL3-201ENST00000249007 CEP72Q9P209 647 aa13.21□□□□□ -0.3
RFPL3-201ENST00000249007 URB1O60287 2271 aaKnown RBP13.2□□□□□ -0.3
RFPL3-201ENST00000249007 KLF18A0A0U1RQI7 1052 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 RECQL4O94761 1208 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 CAPNS1P04632 268 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 P4HBP07237 508 aaKnown RBP13.2□□□□□ -0.3
RFPL3-201ENST00000249007 ADD1P35611 737 aaKnown RBP13.2□□□□□ -0.3
RFPL3-201ENST00000249007 EPHA5P54756 1037 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 SIM1P81133 766 aaPredicted RBP13.2□□□□□ -0.3
RFPL3-201ENST00000249007 ARHGAP29Q52LW3 1261 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 CCDC148Q8NFR7 591 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 SHKBP1Q8TBC3 707 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 ASAP3Q8TDY4 903 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 TCEANC2Q96MN5 208 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 HHIPQ96QV1 700 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 TMEM209Q96SK2 561 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 LXNQ9BS40 222 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 NFKBIZQ9BYH8 718 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 CXCL16Q9H2A7 254 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 SLKQ9H2G2 1235 aaPredicted RBP13.2□□□□□ -0.3
RFPL3-201ENST00000249007 RRAGDQ9NQL2 400 aaPredicted RBP13.2□□□□□ -0.3
RFPL3-201ENST00000249007 XPNPEP1Q9NQW7 623 aa13.2□□□□□ -0.3
RFPL3-201ENST00000249007 NAP1L2Q9ULW6 460 aaPredicted RBP13.2□□□□□ -0.3
RFPL3-201ENST00000249007 CYP3A7-CYP3A51PA0A087WV96 503 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 SPAARA0A1B0GVQ0 90 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 PATE3B3GLJ2 98 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 TBX3O15119 743 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 CYP3A7P24462 503 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 CLCNKBP51801 687 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 TNK2Q07912 1038 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 TWF1Q12792 350 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 PPP2R5CQ13362 524 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 CREB3L3Q68CJ9 461 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 TPGS2Q68CL5 300 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 GPIHBP1Q8IV16 184 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 ARID3BQ8IVW6 561 aaPredicted RBP13.19□□□□□ -0.3
RFPL3-201ENST00000249007 C4orf19Q8IY42 314 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 ADAM32Q8TC27 787 aa13.19□□□□□ -0.3
RFPL3-201ENST00000249007 POLR3BQ9NW08 1133 aaPredicted RBP13.19□□□□□ -0.3
RFPL3-201ENST00000249007 PI4KAP42356 2102 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 ARID2Q68CP9 1835 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 CCDC196A0A1B0GTZ2 297 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 H0Y626 953 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 DPYSL4O14531 572 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 TRIM16O95361 564 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 IGHDP01880 384 aa13.18□□□□□ -0.3
RFPL3-201ENST00000249007 RDXP35241 583 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms