RNA–Protein interactions for RNA: ENST00000241704.7

COPA-201, Transcript of coatomer protein complex subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPA, Length 4,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-201ENST00000241704 CFAP61Q8NHU2 1237 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 MKNK1Q9BUB5 465 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 AMACRQ9UHK6 382 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 PTPN22Q9Y2R2 807 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 REXO2Q9Y3B8 237 aaKnown RBP11.6□□□□□ -0.55
COPA-201ENST00000241704 SSU72P8A0A1W2PR75 194 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 MAGEB2O15479 319 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 ECEL1O95672 775 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 CIITAP33076 1130 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 MAP7D1Q3KQU3 841 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 Q4G0T1 1027 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 ZFPM1Q8IX07 1006 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 CCNYQ8ND76 341 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 GANCQ8TET4 914 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 LZICQ8WZA0 190 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 TRAPPC9Q96Q05 1148 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 TGS1Q96RS0 853 aaKnown RBP11.6□□□□□ -0.55
COPA-201ENST00000241704 FGFR1OP2Q9NVK5 253 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 SUCLA2Q9P2R7 463 aaPredicted RBP11.6□□□□□ -0.55
COPA-201ENST00000241704 LRRC10BA6NIK2 292 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 MED24O75448 989 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 PHBP35232 272 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 POTEAQ6S8J7 498 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 C6orf89Q6UWU4 347 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 GALNT15Q8N3T1 639 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 CENPTQ96BT3 561 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 LMCD1Q9NZU5 365 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 NOC2LQ9Y3T9 749 aaKnown RBP11.6□□□□□ -0.55
COPA-201ENST00000241704 KRT1P04264 644 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 CPB1P15086 417 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 IRGCQ6NXR0 463 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.6□□□□□ -0.55
COPA-201ENST00000241704 AKT1S1Q96B36 256 aa11.6□□□□□ -0.55
COPA-201ENST00000241704 O00370 1275 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 TMCC1O94876 653 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 CYP2C9P11712 490 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 RFC5P40937 340 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 FMO5P49326 533 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 KCNJ2P63252 427 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 PRKCEQ02156 737 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 ZC2HC1CQ53FD0 456 aaPredicted RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 ZNF746Q6NUN9 644 aaPredicted RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 KIAA1683Q9H0B3 1180 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 CARD9Q9H257 536 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 THEGQ9P2T0 379 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 MANSC4A6NHS7 340 aaPredicted RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 VCAM1P19320 739 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 PSMC4P43686 418 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 SNRPFP62306 86 aaKnown RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 SFSWAPQ12872 951 aaKnown RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 MXD4Q14582 209 aaPredicted RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 DUOXA2Q1HG44 320 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 TLDC1Q6P9B6 456 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 RFX6Q8HWS3 928 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 GLYCTKQ8IVS8 523 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 TRIM42Q8IWZ5 723 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 MKL1Q969V6 931 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 ERGIC2Q96RQ1 377 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 UNC45AQ9H3U1 944 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 FAM198AQ9UFP1 575 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 SYNPO2Q9UMS6 1093 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 PARP4Q9UKK3 1724 aaKnown RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 COL14A1Q05707 1796 aaKnown RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 FGGP02679 453 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 FGRP09769 529 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 KRT10P13645 584 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 UCHL3P15374 230 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 ZFXP17010 805 aaPredicted RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 LLGL1Q15334 1064 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 DGKDQ16760 1214 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 PLA2G4FQ68DD2 849 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 TAB3Q8N5C8 712 aaPredicted RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 TMEM143Q96AN5 459 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 STK33Q9BYT3 514 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 ANAPC7Q9UJX3 599 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 FTLP02792 175 aaPredicted RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 VIL1P09327 827 aaKnown RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 IRX4P78413 519 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 CDR2Q01850 454 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 KPNB1Q14974 876 aaKnown RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 MEA1Q16626 185 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 MROH8Q9H579 483 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 NGRNQ9NPE2 291 aaKnown RBP11.59□□□□□ -0.55
COPA-201ENST00000241704 PFDN4Q9NQP4 134 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 SNX24Q9Y343 169 aa11.59□□□□□ -0.55
COPA-201ENST00000241704 BAZ2BQ9UIF8 2168 aaKnown RBP11.58□□□□□ -0.55
COPA-201ENST00000241704 DPPA5A6NC42 116 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 ADM5C9JUS6 153 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 PYGLP06737 847 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 FAM200BP0CF97 657 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 CALB2P22676 271 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 CPT1AP50416 773 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 LAMC2Q13753 1193 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 VEPH1Q14D04 833 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 ARL13BQ3SXY8 428 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 ERMARDQ5T6L9 678 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 FAM47EQ6ZV65 393 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 EIF1ADQ8N9N8 165 aaKnown RBP11.58□□□□□ -0.56
COPA-201ENST00000241704 KIF12Q96FN5 646 aa11.58□□□□□ -0.56
COPA-201ENST00000241704 CALN1Q9BXU9 219 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms