RNA–Protein interactions for RNA: ENST00000011473.6

SYPL1-201, Transcript of synaptophysin like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYPL1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-201ENST00000011473 SIX4Q9UIU6 781 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 RWDD2AQ9UIY3 292 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 SF3B1O75533 1304 aaKnown RBP eCLIP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 BICDL2A1A5D9 508 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 SYCE3A1L190 88 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 EFEMP2O95967 443 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 PTPROQ16827 1216 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 DUOXA2Q1HG44 320 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 ZC3H3Q8IXZ2 948 aaKnown RBP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 RNF168Q8IYW5 571 aaPredicted RBP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 CXorf38Q8TB03 319 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 SYAP1Q96A49 352 aaPredicted RBP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 ANKRD36BP1Q96IX9 119 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 SRRTQ9BXP5 876 aaKnown RBP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.01□□□□□ -0.333e-6■■■■■ 40.4
SYPL1-201ENST00000011473 AGAP1Q9UPQ3 857 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 LZTS1Q9Y250 596 aa13.01□□□□□ -0.33
SYPL1-201ENST00000011473 TIMM13Q9Y5L4 95 aaPredicted RBP13.01□□□□□ -0.33
SYPL1-201ENST00000011473 MYO9BQ13459 2157 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13□□□□□ -0.33
SYPL1-201ENST00000011473 ANO9A1A5B4 782 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 PIRO00625 290 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 CST3P01034 146 aaPredicted RBP13□□□□□ -0.33
SYPL1-201ENST00000011473 SOD2P04179 222 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 EPB41P11171 864 aaKnown RBP13□□□□□ -0.33
SYPL1-201ENST00000011473 TKTP29401 623 aaKnown RBP13□□□□□ -0.33
SYPL1-201ENST00000011473 VAMP7P51809 220 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 LILRA4P59901 499 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 UBE3AQ05086 875 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 BFSP1Q12934 665 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 DCAF17Q5H9S7 520 aaPredicted RBP13□□□□□ -0.33
SYPL1-201ENST00000011473 KIAA1841Q6NSI8 718 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 PRSS55Q6UWB4 352 aaPredicted RBP13□□□□□ -0.33
SYPL1-201ENST00000011473 TRAPPC11Q7Z392 1133 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 NT5DC4Q86YG4 428 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 CREBRFQ8IUR6 639 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 GLYCTKQ8IVS8 523 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 CACTINQ8WUQ7 758 aaKnown RBP13□□□□□ -0.33
SYPL1-201ENST00000011473 BORCS6Q96GS4 357 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 TMEM189-UBE2V1I3L0A0 370 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 CXCL14O95715 111 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 TNNC2P02585 160 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 RPL17P18621 184 aaKnown RBP13□□□□□ -0.33
SYPL1-201ENST00000011473 PTMSP20962 102 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 GCLMP48507 274 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 RBM10P98175 930 aaKnown RBP13□□□□□ -0.33
SYPL1-201ENST00000011473 TYRO3Q06418 890 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 PPP3CAQ08209 521 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 BIRC3Q13489 604 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 SURF1Q15526 300 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 TCEAL5Q5H9L2 206 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 TCERG1LQ5VWI1 586 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 TDRD10Q5VZ19 366 aaKnown RBP13□□□□□ -0.33
SYPL1-201ENST00000011473 INTS8Q75QN2 995 aaKnown RBP13□□□□□ -0.33
SYPL1-201ENST00000011473 TSPAN18Q96SJ8 248 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 DNAJC25Q9H1X3 360 aa13□□□□□ -0.33
SYPL1-201ENST00000011473 ANK1P16157 1881 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 URODP06132 367 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 CTSAP10619 480 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 KRT13P13646 458 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 CLDN10P78369 228 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 PTPN14Q15678 1187 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 CCDC40Q4G0X9 1142 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 RIN2Q8WYP3 895 aaPredicted RBP12.99□□□□□ -0.33
SYPL1-201ENST00000011473 LMAN2LQ9H0V9 348 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 IGFLR1Q9H665 355 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 CHST7Q9NS84 486 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 ITGA11Q9UKX5 1188 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 C5orf42Q9H799 3197 aa12.99□□□□□ -0.33
SYPL1-201ENST00000011473 CARNS1A5YM72 827 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 C2orf71A6NGG8 1288 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 FSCN2O14926 492 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 MAPK13O15264 365 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 LRRN2O75325 713 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 NRIP1P48552 1158 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 GLUD2P49448 558 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 CDR1P51861 262 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 STX1AQ16623 288 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 USP41Q3LFD5 358 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 SV2AQ7L0J3 742 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 MRPL43Q8N983 215 aaKnown RBP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 TMC2Q8TDI7 906 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 CEP63Q96MT8 703 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 TTPALQ9BTX7 342 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 MKNK1Q9BUB5 465 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 HERC2P3Q9BVR0 1158 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 MRPL17Q9NRX2 175 aaKnown RBP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 ARMCX3Q9UH62 379 aaPredicted RBP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 DACH1Q9UI36 760 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 PRRC2BQ5JSZ5 2229 aaKnown RBP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 SLC16A3O15427 465 aaKnown RBP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 TRAPPC3O43617 180 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 PHACTR2O75167 634 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 CLSTN1O94985 981 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 C4BPAP04003 597 aaKnown RBP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 POU3F3P20264 500 aaPredicted RBP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 AARSP49588 968 aaKnown RBP eCLIP12.98□□□□□ -0.33
SYPL1-201ENST00000011473 TAF6P49848 677 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 RBP5P82980 135 aa12.98□□□□□ -0.33
SYPL1-201ENST00000011473 DSG1Q02413 1049 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms