RNA–Protein interactions for RNA: ENSMUST00000225319.1

Ssr1-204, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,610 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-204ENSMUST00000225319 Usp27Q8CEG8 438 aa15.26■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Fam193aQ8CGI1 1231 aaKnown RBP15.26■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Scrn2Q8VCA8 425 aa15.26■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Asb7Q91ZU0 318 aa15.26■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Golph3Q9CRA5 298 aa15.26■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ctnnbl1Q9CWL8 563 aaKnown RBP15.26■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Rab11fip1Q9D620 645 aa15.26■□□□□ 0.03
Ssr1-204ENSMUST00000225319 IscuQ9D7P6 168 aa15.26■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Rsph3bQ9DA80 389 aa15.26■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Cdr2lA2A6T1 465 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Krt28A6BLY7 462 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Trim30cD3YVI9 513 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ttc17E9PVB5 1198 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Olfr552E9Q545 317 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 SprtnG3X912 497 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Cdk14O35495 469 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Cntnap5bQ0V8T8 1292 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Tmprss11aQ3UQ41 389 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Srrm1Q52KI8 946 aaKnown RBP15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Dsg1aQ61495 1057 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 E2f5Q61502 335 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Fam49aQ8BHZ0 323 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Phtf2Q8CB19 747 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Vmn1r203Q8R273 311 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Tbc1d13Q8R3D1 400 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 AdigQ8R400 80 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Olfr1499Q8VG65 314 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ppp1r16bQ8VHQ3 568 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ddx47Q9CWX9 455 aaKnown RBP15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Capn9Q9D805 690 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Dydc1Q9D9T0 175 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Slc40a1Q9JHI9 570 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Adam22Q9R1V6 904 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 1700017N19RikA0A087WPJ1 469 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ptchd4B9EKX1 904 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Gm2030D3Z7C4 212 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Gap43P06837 227 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Itgb7P26011 806 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Gjc1P28229 396 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ndufs6P52503 116 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Oaz1P54369 227 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Nub1P54729 614 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 BC051142Q3V0M8 400 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Specc1Q5SXY1 1067 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ppp2r5eQ61151 467 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 LppQ8BFW7 613 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 4933409G03RikQ8C5U0 320 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ccdc134Q8C7V8 229 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Fam228aQ8CDW1 299 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Dmtf1Q8CE22 761 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 H2-Q4Q8HWB2 354 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Tdrd7Q8K1H1 1086 aaKnown RBP15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Adgrg3Q8R0T6 542 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Msantd4Q91YU3 345 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Fam187aQ9D3R5 417 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Rnf138rt1Q9D9M9 248 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 IvdQ9JHI5 424 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Rnf14Q9JI90 485 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Cog1Q9Z160 980 aa15.25■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Gm11985A0A1B0GS61 206 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Atp2c2A7L9Z8 944 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Mucl2P02815 138 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Klra1P20937 262 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 RarbP22605 482 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ap1m1P35585 423 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Grm2Q14BI2 872 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Hace1Q3U0D9 909 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Skap2Q3UND0 358 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 SpdyaQ5IBH7 310 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Phlda1Q62392 405 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ehbp1Q69ZW3 1231 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Zdhhc24Q6IR37 284 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Kcnt1Q6ZPR4 1224 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Slc20a2Q80UP8 656 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ttc16Q8C1F5 767 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Gnl3Q8CI11 538 aaKnown RBP15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 VasnQ9CZT5 673 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Rab27aQ9ERI2 221 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Rfx5Q9JL61 658 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Kcnd2Q9Z0V2 630 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 ThadaA8C756 1938 aa15.24■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Zscan4-ps3A0A1B0GRH6 506 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Zscan4-ps2A0A1C7CYU6 506 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Scgb2b7D3YYY1 112 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Tnnc2P20801 160 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Mmp3P28862 477 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Vamp7P70280 220 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Zmym1Q3TJB1 983 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Gdpd4Q3TT99 632 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Tcp10aQ80W76 438 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Snx17Q8BVL3 470 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Il33Q8BVZ5 266 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Q8BWG4 1187 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Phka2Q8BWJ3 1235 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Lrrc45Q8CIM1 670 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Stxbp5Q8K400 1152 aaKnown RBP15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Eif3hQ91WK2 352 aaKnown RBP15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Ces1fQ91WU0 561 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 FcrlaQ920A9 352 aa15.23■□□□□ 0.03
Ssr1-204ENSMUST00000225319 Aipl1Q924K1 328 aa15.23■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 30.2 ms