RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 Rfx5Q9JL61 658 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 PollQ9QXE2 573 aaKnown RBP8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Rnf25Q9QZR0 456 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Eif2ak3Q9Z2B5 1114 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Card6E9PWH2 1175 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 2010300C02RikE9Q3M9 1175 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Spata31d1dE9Q5W2 1247 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm13128L7MU96 475 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Vmn2r1O70410 912 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Snx12O70493 165 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 EgfP01132 1217 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Acvr2bP27040 536 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tbxas1P36423 533 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Echdc2Q3TLP5 296 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ppp4r3cQ3V0Y1 813 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Cyp3a16Q64481 504 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tor4aQ8BH02 426 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Snip1Q8BIZ6 383 aaKnown RBP8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gpc2Q8BKV1 579 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 VillQ91YD6 859 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Fam187aQ9D3R5 417 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 DcpsQ9DAR7 338 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ftsj3Q9DBE9 838 aaKnown RBP8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Krt17Q9QWL7 433 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Trp53inp1Q9QXE4 239 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 ChmQ9QXG2 665 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Arih2Q9Z1K6 492 aa8□□□□□ -1.13
Usp40-204ENSMUST00000187758 Wdr81Q5ND34 1934 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Btbd18A0A0A6YY25 723 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tatdn2B7ZNL9 783 aaKnown RBP7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Vmn2r17E9PYF5 849 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tmem265E9Q8G3 109 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Slc6a20bO88575 635 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ass1P16460 412 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Capza3P70190 299 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Krt35Q497I4 455 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 ShbQ6PD21 503 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 PrcpQ7TMR0 491 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Pnma2Q8BHK0 365 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Fam155aQ8CCS2 467 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gpc3Q8CFZ4 579 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Olfr385Q8VGT1 312 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Lman1Q9D0F3 517 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tubgcp4Q9D4F8 667 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 1700123K08RikQ9D991 295 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Msl3Q9WVG9 525 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Arid3bQ9Z1N7 568 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tmem131O70472 1877 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Dlg3P70175 849 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Cdh8P97291 799 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Pou6f1Q07916 301 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Znhit6Q3UFB2 460 aaKnown RBP7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ccdc125Q5U465 500 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Bcar1Q61140 874 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Has1Q61647 583 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 GopcQ8BH60 463 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ttc16Q8C1F5 767 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Myef2Q8C854 591 aaKnown RBP7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gga1Q8R0H9 635 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Rrp1bQ91YK2 724 aaKnown RBP7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Nup50Q9JIH2 466 aaKnown RBP7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Gm28919A0A087WP35 240 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Zfp358E9Q8M1 571 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 CaluO35887 315 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Casp14O89094 257 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Abcb1bP06795 1276 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 TnfP06804 235 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 GssP51855 474 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Slc12a1P55014 1095 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Crhr2Q60748 411 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Tdpoz2Q717B2 364 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Suz12Q80U70 741 aaKnown RBP7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Lonp1Q8CGK3 949 aaKnown RBP7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Defb19Q8K3I8 83 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 TxlnbQ8VBT1 685 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Zmat2Q9CPW7 199 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Doc2gQ9ESN1 387 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 IdeQ9JHR7 1019 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Stk4Q9JI11 487 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Sfmbt1Q9JMD1 863 aa7.99□□□□□ -1.13
Usp40-204ENSMUST00000187758 Pate3B3GLJ3 98 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Abcb5B5X0E4 1255 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Trim12cD3Z3L3 497 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Zfp882E9Q4R4 555 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Zfr2E9Q5M4 874 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Trim55G3X8Y1 545 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Ifnb1P01575 182 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 CcnoP0C242 352 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Rps6ka1P18653 724 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 PkmP52480 531 aaKnown RBP7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Fermt1P59113 677 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 EnahQ03173 802 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Hdgfl1Q2VPR5 283 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 MlxipQ2VPU4 917 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 ItpripQ3TNL8 555 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Sema5aQ62217 1077 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Cfap100Q80VN0 613 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Il33Q8BVZ5 266 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Rassf4Q8CB96 322 aa7.98□□□□□ -1.13
Usp40-204ENSMUST00000187758 Q8CCC3 530 aa7.98□□□□□ -1.13
Retrieved 100 of 22,080 RNA–protein pairs in 17.7 ms