RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Hmgxb3G3X9M3 1254 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Soat2O88908 525 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 VimP20152 466 aaKnown RBP9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Akt1P31750 480 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Stat5bP42232 786 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ext2P70428 718 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tespa1Q3U132 458 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Kiaa0319Q5SZV5 1081 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Sin3aQ60520 1274 aaKnown RBP9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Znf280dQ68FE8 974 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tnpo3Q6P2B1 923 aaKnown RBP9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ndufs8Q8K3J1 212 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ccdc59Q8R2N0 240 aaKnown RBP9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Dact1Q8R4A3 778 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Snap47Q8R570 413 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 GmfbQ9CQI3 142 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 HypmQ9CR04 117 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Kif12Q9D2Z8 642 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 CmipQ9D486 773 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Lrp2bpQ9D4C6 346 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Nif3l1Q9EQ80 376 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Bub1bQ9Z1S0 1052 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Pdpk1Q9Z2A0 559 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Fem1bQ9Z2G0 627 aa9.67□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm4758L7N258 96 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 E2f6O54917 272 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Pou2f1P25425 770 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 InhbcP55104 352 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Lrpap1P55302 360 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Grxcr2Q3TYR5 254 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Lrrc30Q3UV48 300 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Bbs1Q3V3N7 593 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Rabl6Q5U3K5 725 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Arl13bQ640N2 427 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Kif18bQ6PFD6 834 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Slitrk4Q810B8 837 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ublcp1Q8BGR9 318 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Lix1lQ8BQ89 337 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gtdc1Q8BW56 445 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Afap1l1Q8BZI0 768 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cog3Q8CI04 820 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 TatQ8QZR1 454 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cdc16Q8R349 620 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tomm70Q9CZW5 611 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cnn3Q9DAW9 330 aaKnown RBP9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Copg1Q9QZE5 874 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Serinc1Q9QZI8 453 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Astn2Q80Z10 1352 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cyp4a32A2A8T1 509 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm8011K7N6Y5 207 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm8104K7N744 198 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Stam2O88811 523 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Pdia3P27773 505 aaKnown RBP9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Cdk4P30285 303 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Fkbp4P30416 458 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Pou3f2P31360 445 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Actr1aP61164 376 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Krt2Q3TTY5 707 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gm5431Q5NCB3 844 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 9930111J21Rik1Q5SVP0 844 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Pacsin1Q61644 441 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Rad17Q6NXW6 688 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 B4galnt4Q766D5 1034 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Dsg4Q7TMD7 1041 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 RgmbQ7TQ33 436 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Prpf40bQ80W14 870 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gabra5Q8BHJ7 463 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Slc45a1Q8BIV7 751 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Slc9a7Q8BLV3 726 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 9030612E09RikQ8CE20 140 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ttc23Q8CHY7 488 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Stk32cQ8QZV4 488 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Slc30a5Q8R4H9 761 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Swsap1Q8VCI7 278 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Pcdhga11Q91XY8 933 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Mgrn1Q9D074 532 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 IscuQ9D7P6 168 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 NckipsdQ9ESJ4 714 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 PolmQ9JIW4 496 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 PygmQ9WUB3 842 aaKnown RBP9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 CemipQ8BI06 1361 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 TnrQ8BYI9 1358 aa9.66□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tceal7A3KGA4 98 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Olfr554E9Q546 317 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Dnajc21E9Q8D0 531 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Kifc3O35231 824 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 MyocO70624 490 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Orc4O88708 433 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gap43P06837 227 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Dnmt3cP0DOY1 709 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 CntfP51642 198 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 TstP52196 297 aaKnown RBP9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tra2bP62996 288 aaKnown RBP9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gja5Q01231 358 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Mdga1Q0PMG2 940 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Atp2b3Q0VF55 1220 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Tbccd1Q640P7 552 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Gja3Q64448 417 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 Ppip5k2Q6ZQB6 1129 aa9.65□□□□□ -0.86
Upf3b-201ENSMUST00000076265 SpopQ6ZWS8 374 aa9.65□□□□□ -0.86
Retrieved 100 of 22,080 RNA–protein pairs in 22.9 ms