RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Btbd6Q8K2J9 488 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Pcdha10Q91Y20 946 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Erich2E9Q1A6 463 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Irx1P81068 480 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Abraxas1Q8BPZ8 407 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Zmynd10Q99ML0 440 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Aff4Q9ESC8 1160 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Abca8aQ8K442 1620 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Mup5P11591 180 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Ccr1P51675 355 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Trpd52l3Q9CQ14 231 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 MsraQ9D6Y7 233 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Uchl3Q9JKB1 230 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Abhd2Q9QXM0 425 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Inf2Q0GNC1 1273 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Phactr3Q8BYK5 558 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Pla2g12bQ99P27 195 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Morc1Q9WVL5 950 aa19.32■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Yy1Q00899 414 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Pcdhb7Q8CDY9 829 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 HpdlQ8K248 371 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Bhmt2Q91WS4 363 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Adi1Q99JT9 179 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Cuedc2Q9CXX9 284 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 CenpsQ9D084 142 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Cep72Q9D3R3 646 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Fbxo16Q9QZM9 334 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Rab6bP61294 208 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Tcf12Q61286 706 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Tfdp2Q64163 446 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Q6GQV0 436 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Sec23ipQ6NZC7 998 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Mlc1Q8VHK5 382 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Pdcd11Q6NS46 1862 aaKnown RBP19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Fam205aA2APU8 1308 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Etnk2A7MCT6 385 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Tspyl5Q69ZB3 406 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 HnmtQ91VF2 295 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Rpn1Q91YQ5 608 aaKnown RBP19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Trmt11Q9CWH5 460 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Farp1F8VPU2 1048 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 SnrpfP62307 86 aaKnown RBP19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Atg9bQ6EBV9 922 aa19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Atp6v0a1Q9Z1G4 839 aaKnown RBP19.31■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Ccdc8D3YZV8 685 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Lsp1P19973 330 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Vcpip1Q8CDG3 1220 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 OtoaQ8K561 1137 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Agr3Q8R3W7 165 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Fbxw7Q8VBV4 629 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Abcf2Q99LE6 628 aaKnown RBP19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Psmc6P62334 389 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Tmem35bQ3U0Y2 150 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Cyp2j11Q3UNV2 504 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Olfr698Q7TRN4 311 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Casp8O89110 480 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Abi2P62484 446 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Cyth2P63034 400 aaKnown RBP19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Pstpip1P97814 415 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Zbtb5Q7TQG0 670 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Dnajc6Q80TZ3 938 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Phf23Q8BSN5 401 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Nudcd3Q8R1N4 363 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Pgk2P09041 417 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Zfp943Q6NZP4 507 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Ubiad1Q9DC60 336 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Inpp4aQ9EPW0 939 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Slc26a4Q9R155 780 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 DccP70211 1447 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Rap1gapA2ALS5 663 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Rhox3cA2AWM0 215 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Rhox3hL7MU37 215 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Rhox3aQ4TU90 215 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Khdrbs1Q60749 443 aaKnown RBP19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Atl2Q6PA06 583 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Ipo11Q8K2V6 975 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Cox18Q8VC74 331 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Tmem132aQ922P8 1018 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Xpo7Q9EPK7 1087 aa19.3■□□□□ 0.68
Scaf11-201ENSMUST00000047835 FaxcQ3UMF9 409 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Capn9Q9D805 690 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 AatfQ9JKX4 526 aaKnown RBP19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Zbtb18Q9WUK6 522 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Rbbp7Q60973 425 aaKnown RBP19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 RadilQ69Z89 1099 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Ftsj1Q8CBC7 324 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 ChiaQ91XA9 473 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 1700123K08RikQ9D991 295 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Morf4l2Q9R0Q4 288 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Akap1O08715 857 aaKnown RBP19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Slc2a4P14142 509 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Ap2a2P17427 938 aaKnown RBP19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Ip6k2Q80V72 448 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 VcpkmtQ8C436 228 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Stk33Q924X7 491 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Anxa9Q9JHQ0 345 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Arih1Q9Z1K5 555 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Slit1Q80TR4 1531 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 Gm15448F6PZL4 682 aa19.29■□□□□ 0.68
Scaf11-201ENSMUST00000047835 AurkbO70126 345 aa19.29■□□□□ 0.68
Retrieved 100 of 22,080 RNA–protein pairs in 27.2 ms