RNA–Protein interactions for RNA: ENSMUST00000033378.12

Ebf3-201, Transcript of Transcription factor COE3, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ebf3, Length 4,838 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-201ENSMUST00000033378 Dip2cE9PWR4 1557 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Gm3173A6NAS3 172 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Gm3020E9Q3J7 150 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Gm2897K7N6T7 172 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Atp6v1b2P62814 511 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Lrrc55Q3UY51 311 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Gja3Q64448 417 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Dcaf15Q6PFH3 600 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Fbxo44Q8BK26 255 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Gm3411Q8C7R2 150 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Tbc1d10cQ8C9V1 444 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 PrameQ9D4Z5 464 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Ubxn11Q9D572 484 aa19.41■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Prdm2A2A7B5 1709 aaKnown RBP19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Zmym2Q9CU65 1376 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Pdzd8B9EJ80 1147 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Usp35M0QWN7 1009 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 AurkbO70126 345 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Atxn10P28658 475 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Tigd5Q499M4 642 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Prpf31Q8CCF0 499 aaKnown RBP19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Mmtag2Q99LX5 260 aaKnown RBP19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Rad51ap2G3UW63 976 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Nccrp1G3X9C2 266 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Folh1O35409 752 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Rag1P15919 1040 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Ttc39bQ8BYY4 617 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Trim47Q8C0E3 641 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 CtsqQ91ZF4 343 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Ugp2Q91ZJ5 508 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Snx2Q9CWK8 519 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 PodxlQ9R0M4 503 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Zfp850J3QPC5 689 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Garnl3Q3V0G7 1038 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Spdye4aQ5IBH6 268 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 FcgrtQ61559 365 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Naif1Q6PFD7 327 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 N4bp3Q8C7U1 537 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Klhl2Q8JZP3 593 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Ap3m2Q8R2R9 418 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Nfu1Q9QZ23 255 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Krt16Q9Z2K1 469 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Parp14Q2EMV9 1817 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Med24Q99K74 987 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Kif9Q9WV04 790 aa19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Twf2Q9Z0P5 349 aaKnown RBP19.4■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Gm29554A0A087WNW4 188 aa19.39■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Cyp2j6O54750 501 aa19.39■□□□□ 0.7
Ebf3-201ENSMUST00000033378 NfixP70257 488 aa19.39■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Sv2cQ69ZS6 727 aa19.39■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Clca4aQ6Q473 924 aa19.39■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Ric8bQ80XE1 520 aa19.39■□□□□ 0.7
Ebf3-201ENSMUST00000033378 E2f4Q8R0K9 410 aa19.39■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Vmn1r218Q8R261 298 aa19.39■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Terb2Q9D494 218 aa19.39■□□□□ 0.7
Ebf3-201ENSMUST00000033378 Akap12Q9WTQ5 1684 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Fgfr4Q03142 799 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Capn13Q3UW68 665 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Agap3Q8VHH5 910 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Edf1Q9JMG1 148 aaKnown RBP19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Trappc3O55013 180 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Stxbp2Q64324 593 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Klhdc10Q6PAR0 439 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Gga3Q8BMI3 718 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 4933409G03RikQ8C5U0 320 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Atxn7Q8R4I1 867 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Bcs1lQ9CZP5 418 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Snx5Q9D8U8 404 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Nphs1Q9QZS7 1256 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 PtproE9Q612 1226 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Slc27a2O35488 620 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Ttc39dQ0VF76 604 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Rgs9bpQ148R9 237 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Psd3Q2PFD7 1037 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Unc5bQ8K1S3 945 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Slc12a6Q924N4 1150 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Tmem39aQ9CYC3 486 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Ppp1r2Q9DCL8 206 aa19.39■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Pde9aO70628 534 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 PkmP52480 531 aaKnown RBP19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Kiaa1841Q68FF0 718 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Mtfr1lQ9CWE0 289 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Usp29Q9ES63 869 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Tbk1Q9WUN2 729 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Scg3P47867 471 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Ppp3ccP48455 513 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Gm4952Q5FW57 296 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Map2k2Q63932 401 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Tfdp2Q64163 446 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Tmc4Q7TQ65 694 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Ddhd1Q80YA3 547 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Chtf18Q8BIW9 969 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Wdr35Q8BND3 1181 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Fbxl13Q8CDU4 790 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Sgms1Q8VCQ6 419 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 RnpepQ8VCT3 650 aaKnown RBP19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Tesk2Q8VCT9 570 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Dgcr8Q9EQM6 773 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Klra1P20937 262 aa19.38■□□□□ 0.69
Ebf3-201ENSMUST00000033378 Gm10392Q3V3I3 114 aa19.38■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 23.1 ms