RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeast

Gene YDC1, Length 954 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDC1	YPL087W	ERD2	P18414	219 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	ERG9	P29704	444 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	YEF1	P32622	495 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	JEN1	P36035	616 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	BAT1	P38891	393 aa	Known RBP	3.88	□□□□□ -1.79
YDC1	YPL087W	RPL10	P41805	221 aa	Known RBP	3.88	□□□□□ -1.79
YDC1	YPL087W	AIM25	P47140	327 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	ERV29	P53337	310 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	YDR541C	Q03049	344 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	SCS7	Q03529	384 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	DML1	Q03652	475 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	YML108W	Q03759	105 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	PEX30	Q06169	523 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	BRX1	Q08235	291 aa	Known RBP	3.88	□□□□□ -1.79
YDC1	YPL087W	FEX1	Q08913	375 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	BTS1	Q12051	335 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	REX3	Q12090	404 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	RTC5	Q12108	567 aa	Known RBP	3.88	□□□□□ -1.79
YDC1	YPL087W	SPC3	Q12133	184 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	PRM4	Q12498	284 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	NAG1	Q8TGN9	163 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	FSH3	Q99369	266 aa		3.88	□□□□□ -1.79
YDC1	YPL087W	PPH21	P23594	369 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	PAU2	P32612	120 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	ARC19	P33204	171 aa	Known RBP	3.87	□□□□□ -1.79
YDC1	YPL087W	YKL071W	P36086	256 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	ANR2	P36090	516 aa	Predicted RBP	3.87	□□□□□ -1.79
YDC1	YPL087W	RTC2	P38279	296 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	MNL1	P38888	796 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	FET3	P38993	636 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	VMA7	P39111	118 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	HPA3	P39979	161 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	SIM1	P40472	476 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	LSM1	P47017	172 aa	Known RBP	3.87	□□□□□ -1.79
YDC1	YPL087W	CCC1	P47818	322 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	MST27	P53176	234 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	VOA1	P53262	265 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	YGR266W	P53326	701 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	PGA1	P53896	198 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	HAL1	Q01766	294 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	DCR2	Q05924	578 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	MDM32	Q12171	622 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	YDR262W	Q12331	272 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	BBP1	Q12365	385 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	PSF1	Q12488	208 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	YLR099W-A	Q3E798	87 aa		3.87	□□□□□ -1.79
YDC1	YPL087W	HIS3	P06633	220 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	ARF1	P11076	181 aa	Known RBP	3.86	□□□□□ -1.79
YDC1	YPL087W	NHP6B	P11633	99 aa	Known RBP	3.86	□□□□□ -1.79
YDC1	YPL087W	NRP1	P32770	719 aa	Known RBP RIP-Chip data	3.86	□□□□□ -1.79	not detected
YDC1	YPL087W	MSN4	P33749	630 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	SFK1	P35735	353 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	RRF1	P38771	230 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	YER137C	P40083	148 aa	Known RBP	3.86	□□□□□ -1.79
YDC1	YPL087W	RFC4	P40339	323 aa	Known RBP	3.86	□□□□□ -1.79
YDC1	YPL087W	LCB3	P47013	409 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	YGL204C	P53089	101 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	YML096W	Q04489	525 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	ARV1	Q06541	321 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	MMT2	Q08970	484 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	FEX2	Q08991	375 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	YDL109C	Q12103	647 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	ATG31	Q12421	196 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	ERP4	Q12450	207 aa		3.86	□□□□□ -1.79
YDC1	YPL087W	ARG80	P07249	177 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	DSF1	P0CX08	502 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	YNR073C	P0CX09	502 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	SRX1	P36077	127 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	MAL32	P38158	584 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	YMR144W	P40214	342 aa	Known RBP	3.85	□□□□□ -1.79
YDC1	YPL087W	SYS1	P41544	203 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	ALB1	P47019	175 aa	Predicted RBP	3.85	□□□□□ -1.79
YDC1	YPL087W	IBA57	P47158	497 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	CDH1	P53197	566 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	MAL12	P53341	584 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	SWS2	P53937	143 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	PRM15	Q03262	622 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	YLR030W	Q07967	263 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	YOS9	Q99220	542 aa		3.85	□□□□□ -1.79
YDC1	YPL087W	RPS18A	P0CX55	146 aa	Known RBP	3.84	□□□□□ -1.79
YDC1	YPL087W	RPS18B	P0CX56	146 aa	Predicted RBP	3.84	□□□□□ -1.79
YDC1	YPL087W	ERD1	P16151	362 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	TIM12	P32830	109 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	MRPL15	P36523	253 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	ECM34	P38728	170 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	HTD2	P38790	280 aa	Known RBP	3.84	□□□□□ -1.79
YDC1	YPL087W	PFS1	P38872	237 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	PTI1	P39927	425 aa	Predicted RBP	3.84	□□□□□ -1.79
YDC1	YPL087W	TIF34	P40217	347 aa	Known RBP	3.84	□□□□□ -1.79
YDC1	YPL087W	UBC12	P52491	188 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	SYF2	P53277	215 aa	Predicted RBP	3.84	□□□□□ -1.79
YDC1	YPL087W	SAY1	P53324	424 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	YLR460C	P54007	376 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	DID2	P69771	204 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	COA4	Q05809	96 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	COQ10	Q08058	207 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	BSC6	Q08280	497 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	ATG41	Q12048	136 aa		3.84	□□□□□ -1.79
YDC1	YPL087W	MSW1	P04803	379 aa		3.83	□□□□□ -1.8
YDC1	YPL087W	MATALPHA1	P0CY06	175 aa		3.83	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 83.6 ms