RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeast

Gene SGF11, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SGF11	YPL047W	SAY1	P53324	424 aa		0.26	□□□□□ -2.37
SGF11	YPL047W	SNZ2	P53824	298 aa		0.26	□□□□□ -2.37
SGF11	YPL047W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	0.26	□□□□□ -2.37	not detected
SGF11	YPL047W	ALG11	P53954	548 aa	Known RBP	0.26	□□□□□ -2.37
SGF11	YPL047W	YNL010W	P53981	241 aa	Known RBP	0.26	□□□□□ -2.37
SGF11	YPL047W	ABF2	Q02486	183 aa		0.26	□□□□□ -2.37
SGF11	YPL047W	EGD1	Q02642	157 aa	Known RBP	0.26	□□□□□ -2.37
SGF11	YPL047W	LCL2	Q08045	131 aa		0.26	□□□□□ -2.37
SGF11	YPL047W	CSM4	Q08955	156 aa		0.26	□□□□□ -2.37
SGF11	YPL047W	MSB2	P32334	1306 aa		0.26	□□□□□ -2.37
SGF11	YPL047W	SSK22	P25390	1331 aa	Predicted RBP	0.25	□□□□□ -2.37
SGF11	YPL047W	IPP1	P00817	287 aa	Known RBP	0.25	□□□□□ -2.37
SGF11	YPL047W	REP2	P03872	296 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	RPS5	P26783	225 aa	Known RBP	0.25	□□□□□ -2.37
SGF11	YPL047W	YKL075C	P36083	450 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	YBR063C	P38083	404 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	UMP1	P38293	148 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	EDC3	P39998	551 aa	Known RBP	0.25	□□□□□ -2.37
SGF11	YPL047W	SOK1	P40317	901 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	FLX1	P40464	311 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	YFL065C	P43539	102 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	GLG2	P47011	380 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	ILM1	P47155	203 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	AIF1	P52923	378 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	OST6	Q03723	332 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	TRM12	Q04235	462 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	SEI1	Q06058	285 aa		0.25	□□□□□ -2.37
SGF11	YPL047W	YET1	P35723	206 aa		0.24	□□□□□ -2.37
SGF11	YPL047W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.24	□□□□□ -2.37	not detected
SGF11	YPL047W	YBR209W	P38311	105 aa		0.24	□□□□□ -2.37
SGF11	YPL047W	YHL042W	P38729	150 aa		0.24	□□□□□ -2.37
SGF11	YPL047W	PEX17	P40155	199 aa		0.24	□□□□□ -2.37
SGF11	YPL047W	ERJ5	P43613	295 aa	Predicted RBP	0.24	□□□□□ -2.37
SGF11	YPL047W	YLR413W	Q06689	675 aa		0.24	□□□□□ -2.37
SGF11	YPL047W	YPL229W	Q99395	206 aa		0.24	□□□□□ -2.37
SGF11	YPL047W	MET5	P47169	1442 aa		0.23	□□□□□ -2.37
SGF11	YPL047W	SLH1	P53327	1967 aa	Known RBP	0.23	□□□□□ -2.37
SGF11	YPL047W	STF1	P01098	86 aa		0.23	□□□□□ -2.37
SGF11	YPL047W	RPL24A	P04449	155 aa	Known RBP	0.23	□□□□□ -2.37
SGF11	YPL047W	FCY2	P17064	533 aa		0.23	□□□□□ -2.37
SGF11	YPL047W	DAL82	P21705	255 aa		0.23	□□□□□ -2.37
SGF11	YPL047W	RNA15	P25299	296 aa	Predicted RBP	0.23	□□□□□ -2.37
SGF11	YPL047W	DAL80	P26343	269 aa		0.23	□□□□□ -2.37
SGF11	YPL047W	SGE1	P33335	543 aa		0.23	□□□□□ -2.37
SGF11	YPL047W	SIP3	P38717	1229 aa		0.23	□□□□□ -2.37
SGF11	YPL047W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.23	□□□□□ -2.37	not detected
SGF11	YPL047W	CAT5	P41735	233 aa		0.23	□□□□□ -2.37
SGF11	YPL047W	USE1	P53146	245 aa		0.23	□□□□□ -2.37
SGF11	YPL047W	CWC27	Q02770	301 aa		0.23	□□□□□ -2.37
SGF11	YPL047W	YML108W	Q03759	105 aa		0.23	□□□□□ -2.37
SGF11	YPL047W	SPG3	Q04398	127 aa	Predicted RBP	0.23	□□□□□ -2.37
SGF11	YPL047W	ADH6	Q04894	360 aa	Known RBP	0.23	□□□□□ -2.37
SGF11	YPL047W	FSF1	Q12029	327 aa	Known RBP	0.23	□□□□□ -2.37
SGF11	YPL047W	MRPL23	Q12487	163 aa	Predicted RBP	0.23	□□□□□ -2.37
SGF11	YPL047W	PDR18	P53756	1333 aa		0.22	□□□□□ -2.37
SGF11	YPL047W	MRP1	P10662	321 aa	Known RBP	0.22	□□□□□ -2.37
SGF11	YPL047W	OPI1	P21957	404 aa		0.22	□□□□□ -2.37
SGF11	YPL047W	RPT5	P33297	434 aa	Known RBP	0.22	□□□□□ -2.37
SGF11	YPL047W	SNC2	P33328	115 aa		0.22	□□□□□ -2.37
SGF11	YPL047W	SRY1	P36007	326 aa		0.22	□□□□□ -2.37
SGF11	YPL047W	OPY1	P38271	328 aa		0.22	□□□□□ -2.37
SGF11	YPL047W	YHR127W	P38833	243 aa	Known RBP	0.22	□□□□□ -2.37
SGF11	YPL047W	IRC22	P40006	225 aa		0.22	□□□□□ -2.37
SGF11	YPL047W	KNH1	P50112	268 aa		0.22	□□□□□ -2.37
SGF11	YPL047W	ARO8	P53090	500 aa	Known RBP	0.22	□□□□□ -2.37
SGF11	YPL047W	YNL247W	P53852	767 aa	Known RBP	0.22	□□□□□ -2.37
SGF11	YPL047W	RCE1	Q03530	315 aa		0.22	□□□□□ -2.37
SGF11	YPL047W	YML096W	Q04489	525 aa		0.22	□□□□□ -2.37
SGF11	YPL047W	SSQ1	Q05931	657 aa	Predicted RBP	0.22	□□□□□ -2.37
SGF11	YPL047W	BTS1	Q12051	335 aa		0.22	□□□□□ -2.37
SGF11	YPL047W	SNU23	Q12368	194 aa	Predicted RBP	0.22	□□□□□ -2.37
SGF11	YPL047W	ATG40	Q99325	256 aa		0.22	□□□□□ -2.37
SGF11	YPL047W	YHR139C-A	O13536	103 aa		0.21	□□□□□ -2.38
SGF11	YPL047W	POL30	P15873	258 aa	Known RBP	0.21	□□□□□ -2.38
SGF11	YPL047W	MRPS28	P21771	286 aa		0.21	□□□□□ -2.38
SGF11	YPL047W	YNR077C	P53758	84 aa		0.21	□□□□□ -2.38
SGF11	YPL047W	ERV25	P54837	211 aa	Known RBP	0.21	□□□□□ -2.38
SGF11	YPL047W	GAS3	Q03655	524 aa		0.21	□□□□□ -2.38
SGF11	YPL047W	COX20	Q04935	205 aa		0.21	□□□□□ -2.38
SGF11	YPL047W	GPM2	Q12008	311 aa		0.21	□□□□□ -2.38
SGF11	YPL047W	LSO2	Q3E772	92 aa	Known RBP	0.21	□□□□□ -2.38
SGF11	YPL047W	YHR212W-A	P0CX91	67 aa		0.2	□□□□□ -2.38
SGF11	YPL047W	MRPL17	P36528	281 aa		0.2	□□□□□ -2.38
SGF11	YPL047W	RIB1	P38066	345 aa		0.2	□□□□□ -2.38
SGF11	YPL047W	YER034W	P40022	185 aa	Known RBP	0.2	□□□□□ -2.38
SGF11	YPL047W	MCM22	P47167	239 aa		0.2	□□□□□ -2.38
SGF11	YPL047W	YJR149W	P47177	404 aa		0.2	□□□□□ -2.38
SGF11	YPL047W	RHO3	Q00245	231 aa	Known RBP	0.2	□□□□□ -2.38
SGF11	YPL047W	SWP1	Q02795	286 aa		0.2	□□□□□ -2.38
SGF11	YPL047W	YDR209C	Q03480	137 aa		0.2	□□□□□ -2.38
SGF11	YPL047W	SDO1	Q07953	250 aa	Known RBP	0.2	□□□□□ -2.38
SGF11	YPL047W	YOR029W	Q12243	111 aa		0.2	□□□□□ -2.38
SGF11	YPL047W	YLR236C	A0A023PZG4	107 aa		0.19	□□□□□ -2.38
SGF11	YPL047W	MSF1	P08425	469 aa		0.19	□□□□□ -2.38
SGF11	YPL047W	SEC11	P15367	167 aa		0.19	□□□□□ -2.38
SGF11	YPL047W	SRB4	P32569	687 aa		0.19	□□□□□ -2.38
SGF11	YPL047W	UGX2	P32772	223 aa		0.19	□□□□□ -2.38
SGF11	YPL047W	POP4	P38336	279 aa		0.19	□□□□□ -2.38
SGF11	YPL047W	URA8	P38627	578 aa	Predicted RBP	0.19	□□□□□ -2.38
SGF11	YPL047W	YMR144W	P40214	342 aa	Known RBP	0.19	□□□□□ -2.38

Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms