RNA–Protein interactions for RNA: YMR078C

CTF18, Transcript of Subunit of a complex with Ctf8p, yeastyeast

Gene CTF18, Length 2,226 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF18YMR078C SNF6P18888 332 aa3.08□□□□□ -1.92
CTF18YMR078C MGA1P53050 456 aa3.08□□□□□ -1.92
CTF18YMR078C YMR279CQ03263 540 aa3.08□□□□□ -1.92
CTF18YMR078C YML096WQ04489 525 aa3.08□□□□□ -1.92
CTF18YMR078C RPB4P20433 221 aaPredicted RBP3.07□□□□□ -1.92
CTF18YMR078C SSO1P32867 290 aa3.07□□□□□ -1.92
CTF18YMR078C YKT6P36015 200 aaKnown RBP3.07□□□□□ -1.92
CTF18YMR078C BRR6P53062 197 aa3.07□□□□□ -1.92
CTF18YMR078C YOR020W-AQ3E824 90 aa3.07□□□□□ -1.92
CTF18YMR078C NCB2Q92317 146 aa3.07□□□□□ -1.92
CTF18YMR078C GRX2P17695 143 aaKnown RBP3.07□□□□□ -1.92
CTF18YMR078C PRX1P34227 261 aaKnown RBP3.07□□□□□ -1.92
CTF18YMR078C FYV6P53913 173 aa3.07□□□□□ -1.92
CTF18YMR078C HEM25Q07534 307 aa3.07□□□□□ -1.92
CTF18YMR078C CDC28P00546 298 aaKnown RBP3.06□□□□□ -1.92
CTF18YMR078C FCY2P17064 533 aa3.06□□□□□ -1.92
CTF18YMR078C STE18P18852 110 aa3.06□□□□□ -1.92
CTF18YMR078C TAF14P35189 244 aa3.06□□□□□ -1.92
CTF18YMR078C IRC22P40006 225 aa3.06□□□□□ -1.92
CTF18YMR078C DAN1P47178 298 aa3.06□□□□□ -1.92
CTF18YMR078C NUP57P48837 541 aa3.06□□□□□ -1.92
CTF18YMR078C EMC6Q12431 108 aa3.06□□□□□ -1.92
CTF18YMR078C DBF2P22204 572 aa3.05□□□□□ -1.92
CTF18YMR078C YOR062CP36025 268 aa3.05□□□□□ -1.92
CTF18YMR078C GRE3P38715 327 aaKnown RBP RIP-Chip data3.05□□□□□ -1.92not detected
CTF18YMR078C ADO1P47143 340 aaKnown RBP3.05□□□□□ -1.92
CTF18YMR078C YGR026WP53217 278 aa3.05□□□□□ -1.92
CTF18YMR078C CDC36P06100 191 aaPredicted RBP3.05□□□□□ -1.92
CTF18YMR078C YBR063CP38083 404 aa3.05□□□□□ -1.92
CTF18YMR078C DID2P69771 204 aa3.04□□□□□ -1.92
CTF18YMR078C ABF2Q02486 183 aa3.04□□□□□ -1.92
CTF18YMR078C RPL28P02406 149 aaKnown RBP3.04□□□□□ -1.92
CTF18YMR078C SIP3P38717 1229 aa3.04□□□□□ -1.92
CTF18YMR078C YAR068WP39564 161 aa3.04□□□□□ -1.92
CTF18YMR078C MNN5P46982 586 aa3.04□□□□□ -1.92
CTF18YMR078C DRS2P39524 1355 aa3.03□□□□□ -1.92
CTF18YMR078C OAC1P32332 324 aa3.03□□□□□ -1.92
CTF18YMR078C ARR2Q06597 130 aa3.03□□□□□ -1.92
CTF18YMR078C JLP1Q12358 412 aa3.03□□□□□ -1.92
CTF18YMR078C MHT1Q12525 324 aa3.03□□□□□ -1.92
CTF18YMR078C ADH3P07246 375 aaKnown RBP3.03□□□□□ -1.93
CTF18YMR078C DOG1P38774 246 aa3.03□□□□□ -1.93
CTF18YMR078C FCY21P40039 528 aa3.03□□□□□ -1.93
CTF18YMR078C RPL9AP05738 191 aaKnown RBP3.02□□□□□ -1.93
CTF18YMR078C BXI1P48558 297 aa3.02□□□□□ -1.93
CTF18YMR078C RPL9BP51401 191 aaKnown RBP3.02□□□□□ -1.93
CTF18YMR078C SSQ1Q05931 657 aaPredicted RBP3.02□□□□□ -1.93
CTF18YMR078C VMA11P32842 164 aa3.01□□□□□ -1.93
CTF18YMR078C YJL027CP47063 138 aaPredicted RBP3.01□□□□□ -1.93
CTF18YMR078C YDR248CQ03786 193 aa3.01□□□□□ -1.93
CTF18YMR078C ADF1Q2V2Q1 113 aa3.01□□□□□ -1.93
CTF18YMR078C CWC21Q03375 135 aaKnown RBP3.01□□□□□ -1.93
CTF18YMR078C BNA7Q04066 261 aa3.01□□□□□ -1.93
CTF18YMR078C TRM12Q04235 462 aa3.01□□□□□ -1.93
CTF18YMR078C DOG2P38773 246 aa3□□□□□ -1.93
CTF18YMR078C YNL010WP53981 241 aaKnown RBP3□□□□□ -1.93
CTF18YMR078C LPP1Q04396 274 aa3□□□□□ -1.93
CTF18YMR078C JIP3O13555 125 aa3□□□□□ -1.93
CTF18YMR078C YPR170W-BP0C5R9 85 aa3□□□□□ -1.93
CTF18YMR078C PSF1Q12488 208 aa3□□□□□ -1.93
CTF18YMR078C PUT1P09368 476 aa2.99□□□□□ -1.93
CTF18YMR078C YOR283WQ12040 230 aaKnown RBP2.99□□□□□ -1.93
CTF18YMR078C LSO2Q3E772 92 aaKnown RBP2.99□□□□□ -1.93
CTF18YMR078C TCA17P32613 152 aa2.99□□□□□ -1.93
CTF18YMR078C YHR180WP38868 163 aa2.99□□□□□ -1.93
CTF18YMR078C RSM25P40496 264 aa2.99□□□□□ -1.93
CTF18YMR078C PRM10P42946 383 aa2.99□□□□□ -1.93
CTF18YMR078C FAR7P43592 221 aa2.99□□□□□ -1.93
CTF18YMR078C TUS1Q06412 1307 aa2.98□□□□□ -1.93
CTF18YMR078C RAS2P01120 322 aaKnown RBP2.98□□□□□ -1.93
CTF18YMR078C RFA3P26755 122 aaKnown RBP2.98□□□□□ -1.93
CTF18YMR078C APS1P35181 156 aa2.98□□□□□ -1.93
CTF18YMR078C IRC18P47056 224 aa2.98□□□□□ -1.93
CTF18YMR078C PRM8P53174 237 aa2.98□□□□□ -1.93
CTF18YMR078C PDR17P53844 350 aa2.98□□□□□ -1.93
CTF18YMR078C PET191Q02772 108 aa2.98□□□□□ -1.93
CTF18YMR078C YCL012CQ8J0M4 134 aa2.97□□□□□ -1.93
CTF18YMR078C REP2P03872 296 aa2.97□□□□□ -1.93
CTF18YMR078C MSW1P04803 379 aa2.97□□□□□ -1.93
CTF18YMR078C SEC4P07560 215 aaKnown RBP2.97□□□□□ -1.93
CTF18YMR078C YMD8Q03697 442 aa2.97□□□□□ -1.93
CTF18YMR078C MRPS8Q03799 155 aa2.97□□□□□ -1.93
CTF18YMR078C ATO3Q12359 275 aa2.97□□□□□ -1.93
CTF18YMR078C IKI1P38874 309 aa2.96□□□□□ -1.94
CTF18YMR078C CUS2P53830 285 aaPredicted RBP2.96□□□□□ -1.94
CTF18YMR078C YML108WQ03759 105 aa2.96□□□□□ -1.94
CTF18YMR078C SPG3Q04398 127 aaPredicted RBP2.96□□□□□ -1.94
CTF18YMR078C NEJ1Q06148 342 aa2.96□□□□□ -1.94
CTF18YMR078C CDC8P00572 216 aa2.96□□□□□ -1.94
CTF18YMR078C NRG2P38082 220 aa2.96□□□□□ -1.94
CTF18YMR078C YIL001WP40560 513 aa2.96□□□□□ -1.94
CTF18YMR078C YHR086W-AQ3E746 53 aa2.96□□□□□ -1.94
CTF18YMR078C TDA8Q6B2U8 126 aa2.95□□□□□ -1.94
CTF18YMR078C GCN3P14741 305 aa2.94□□□□□ -1.94
CTF18YMR078C SCL1P21243 252 aaKnown RBP2.94□□□□□ -1.94
CTF18YMR078C PEX4P29340 183 aa2.94□□□□□ -1.94
CTF18YMR078C MDH3P32419 343 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
CTF18YMR078C SPS18P32572 300 aa2.94□□□□□ -1.94
CTF18YMR078C YLR156WP0CE96 114 aa2.93□□□□□ -1.94
CTF18YMR078C YLR159WP0CE97 114 aa2.93□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 262.8 ms