RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C ADH6Q04894 360 aaKnown RBP0.27□□□□□ -2.37
VPS20YMR077C TVP38P36164 337 aa0.26□□□□□ -2.37
VPS20YMR077C CAT5P41735 233 aa0.26□□□□□ -2.37
VPS20YMR077C GLG2P47011 380 aa0.26□□□□□ -2.37
VPS20YMR077C YNR077CP53758 84 aa0.26□□□□□ -2.37
VPS20YMR077C EGD1Q02642 157 aaKnown RBP0.26□□□□□ -2.37
VPS20YMR077C TRM12Q04235 462 aa0.26□□□□□ -2.37
VPS20YMR077C YNL146C-AQ3E7Z1 64 aa0.26□□□□□ -2.37
VPS20YMR077C PDR18P53756 1333 aa0.26□□□□□ -2.37
VPS20YMR077C YBR063CP38083 404 aa0.25□□□□□ -2.37
VPS20YMR077C EMC2P47133 292 aaKnown RBP0.25□□□□□ -2.37
VPS20YMR077C SSQ1Q05931 657 aaPredicted RBP0.25□□□□□ -2.37
VPS20YMR077C SEI1Q06058 285 aa0.25□□□□□ -2.37
VPS20YMR077C YPR170W-BP0C5R9 85 aa0.24□□□□□ -2.37
VPS20YMR077C ERD2P18414 219 aa0.24□□□□□ -2.37
VPS20YMR077C DAL80P26343 269 aa0.24□□□□□ -2.37
VPS20YMR077C RPS5P26783 225 aaKnown RBP0.24□□□□□ -2.37
VPS20YMR077C RRF1P38771 230 aa0.24□□□□□ -2.37
VPS20YMR077C BIG1P38813 335 aa0.24□□□□□ -2.37
VPS20YMR077C YHR127WP38833 243 aaKnown RBP0.24□□□□□ -2.37
VPS20YMR077C BFR1P38934 470 aaKnown RBP RIP-Chip data0.24□□□□□ -2.37 RIP-Chip
VPS20YMR077C SAY1P53324 424 aa0.24□□□□□ -2.37
VPS20YMR077C YPL229WQ99395 206 aa0.24□□□□□ -2.37
VPS20YMR077C RPL24AP04449 155 aaKnown RBP0.23□□□□□ -2.37
VPS20YMR077C YHR212W-AP0CX91 67 aa0.23□□□□□ -2.37
VPS20YMR077C RNA15P25299 296 aaPredicted RBP0.23□□□□□ -2.37
VPS20YMR077C PBN1P25580 416 aa0.23□□□□□ -2.37
VPS20YMR077C SRY1P36007 326 aa0.23□□□□□ -2.37
VPS20YMR077C SOK1P40317 901 aa0.23□□□□□ -2.37
VPS20YMR077C RSM25P40496 264 aa0.23□□□□□ -2.37
VPS20YMR077C ERJ5P43613 295 aaPredicted RBP0.23□□□□□ -2.37
VPS20YMR077C ILM1P47155 203 aa0.23□□□□□ -2.37
VPS20YMR077C DOC1P53068 250 aa0.23□□□□□ -2.37
VPS20YMR077C YML096WQ04489 525 aa0.23□□□□□ -2.37
VPS20YMR077C PSF1Q12488 208 aa0.23□□□□□ -2.37
VPS20YMR077C YHR139C-AO13536 103 aa0.22□□□□□ -2.37
VPS20YMR077C DAL82P21705 255 aa0.22□□□□□ -2.37
VPS20YMR077C YMR144WP40214 342 aaKnown RBP0.22□□□□□ -2.37
VPS20YMR077C MPP6P53725 186 aaPredicted RBP0.22□□□□□ -2.37
VPS20YMR077C YDL180WQ12301 547 aa0.22□□□□□ -2.37
VPS20YMR077C SNU23Q12368 194 aaPredicted RBP0.22□□□□□ -2.37
VPS20YMR077C TUS1Q06412 1307 aa0.21□□□□□ -2.38
VPS20YMR077C POL30P15873 258 aaKnown RBP0.21□□□□□ -2.38
VPS20YMR077C YET1P35723 206 aa0.21□□□□□ -2.38
VPS20YMR077C VPS21P36017 210 aaKnown RBP0.21□□□□□ -2.38
VPS20YMR077C RIB1P38066 345 aa0.21□□□□□ -2.38
VPS20YMR077C MEP1P40260 492 aa0.21□□□□□ -2.38
VPS20YMR077C YAR1P46683 200 aa0.21□□□□□ -2.38
VPS20YMR077C ABF2Q02486 183 aa0.21□□□□□ -2.38
VPS20YMR077C GAS3Q03655 524 aa0.21□□□□□ -2.38
VPS20YMR077C MSH5Q12175 901 aa0.21□□□□□ -2.38
VPS20YMR077C YLR126CQ12288 251 aa0.21□□□□□ -2.38
VPS20YMR077C MRPS28P21771 286 aa0.2□□□□□ -2.38
VPS20YMR077C TFC1P32367 649 aa0.2□□□□□ -2.38
VPS20YMR077C MRPL37P36532 105 aa0.2□□□□□ -2.38
VPS20YMR077C REP2P03872 296 aa0.19□□□□□ -2.38
VPS20YMR077C KNH1P50112 268 aa0.19□□□□□ -2.38
VPS20YMR077C CUS2P53830 285 aaPredicted RBP0.19□□□□□ -2.38
VPS20YMR077C POP3P53833 195 aaPredicted RBP0.19□□□□□ -2.38
VPS20YMR077C NOP13P53883 403 aaKnown RBP RIP-Chip data0.19□□□□□ -2.38not detected
VPS20YMR077C ERV25P54837 211 aaKnown RBP0.19□□□□□ -2.38
VPS20YMR077C SDO1Q07953 250 aaKnown RBP0.19□□□□□ -2.38
VPS20YMR077C CSM4Q08955 156 aa0.19□□□□□ -2.38
VPS20YMR077C SIR2P06700 562 aa0.18□□□□□ -2.38
VPS20YMR077C TCP1P12612 559 aaKnown RBP0.18□□□□□ -2.38
VPS20YMR077C YMD8Q03697 442 aa0.18□□□□□ -2.38
VPS20YMR077C ATG22P25568 528 aa0.17□□□□□ -2.38
VPS20YMR077C YKL075CP36083 450 aa0.17□□□□□ -2.38
VPS20YMR077C UMP1P38293 148 aa0.17□□□□□ -2.38
VPS20YMR077C SIP3P38717 1229 aa0.17□□□□□ -2.38
VPS20YMR077C PET100P38958 111 aa0.17□□□□□ -2.38
VPS20YMR077C IRC22P40006 225 aa0.17□□□□□ -2.38
VPS20YMR077C PEX17P40155 199 aa0.17□□□□□ -2.38
VPS20YMR077C EAF6P47128 113 aa0.17□□□□□ -2.38
VPS20YMR077C ARO8P53090 500 aaKnown RBP0.17□□□□□ -2.38
VPS20YMR077C YNL010WP53981 241 aaKnown RBP0.17□□□□□ -2.38
VPS20YMR077C SNZ1Q03148 297 aa0.17□□□□□ -2.38
VPS20YMR077C RCE1Q03530 315 aa0.17□□□□□ -2.38
VPS20YMR077C LPP1Q04396 274 aa0.17□□□□□ -2.38
VPS20YMR077C BTS1Q12051 335 aa0.17□□□□□ -2.38
VPS20YMR077C YAE1P47118 141 aaPredicted RBP0.16□□□□□ -2.38
VPS20YMR077C YDR248CQ03786 193 aa0.16□□□□□ -2.38
VPS20YMR077C YLR156WP0CE96 114 aa0.15□□□□□ -2.39
VPS20YMR077C YLR159WP0CE97 114 aa0.15□□□□□ -2.39
VPS20YMR077C YLR161WP0CE98 114 aa0.15□□□□□ -2.39
VPS20YMR077C SNC2P33328 115 aa0.15□□□□□ -2.39
VPS20YMR077C MRPL17P36528 281 aa0.15□□□□□ -2.39
VPS20YMR077C YBR209WP38311 105 aa0.15□□□□□ -2.39
VPS20YMR077C URA8P38627 578 aaPredicted RBP0.15□□□□□ -2.39
VPS20YMR077C YFL065CP43539 102 aa0.15□□□□□ -2.39
VPS20YMR077C TSC3Q3E790 80 aa0.15□□□□□ -2.39
VPS20YMR077C MSF1P08425 469 aa0.14□□□□□ -2.39
VPS20YMR077C POP4P38336 279 aa0.14□□□□□ -2.39
VPS20YMR077C DOG2P38773 246 aa0.14□□□□□ -2.39
VPS20YMR077C EDC3P39998 551 aaKnown RBP0.14□□□□□ -2.39
VPS20YMR077C FLX1P40464 311 aa0.14□□□□□ -2.39
VPS20YMR077C FSF1Q12029 327 aaKnown RBP0.14□□□□□ -2.39
VPS20YMR077C YOR029WQ12243 111 aa0.14□□□□□ -2.39
VPS20YMR077C ATG40Q99325 256 aa0.14□□□□□ -2.39
VPS20YMR077C SLH1P53327 1967 aaKnown RBP0.14□□□□□ -2.39
Retrieved 100 of 5,963 RNA–protein pairs in 68.1 ms