RNA–Protein interactions for RNA: YLR022C

SDO1, Transcript of Guanine nucleotide exchange factor (GEF) for Ria1p, yeastyeast

Gene SDO1, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDO1YLR022C OTU1P43558 301 aa2.49□□□□□ -2.01
SDO1YLR022C RPA43P46669 326 aa2.49□□□□□ -2.01
SDO1YLR022C PMT5P52867 743 aa2.49□□□□□ -2.01
SDO1YLR022C GEP7P53171 287 aa2.49□□□□□ -2.01
SDO1YLR022C GOR1P53839 350 aa2.49□□□□□ -2.01
SDO1YLR022C PET191Q02772 108 aa2.49□□□□□ -2.01
SDO1YLR022C FMN1Q03778 218 aa2.49□□□□□ -2.01
SDO1YLR022C YMR114CQ04471 368 aaKnown RBP2.49□□□□□ -2.01
SDO1YLR022C YLR283WQ05867 314 aa2.49□□□□□ -2.01
SDO1YLR022C SEC10Q06245 871 aa2.49□□□□□ -2.01
SDO1YLR022C BER1Q06688 274 aaKnown RBP2.49□□□□□ -2.01
SDO1YLR022C NDE2Q07500 545 aa2.49□□□□□ -2.01
SDO1YLR022C TIM18Q08749 192 aa2.49□□□□□ -2.01
SDO1YLR022C NCA2Q12374 616 aa2.49□□□□□ -2.01
SDO1YLR022C RVS161P25343 265 aaKnown RBP2.48□□□□□ -2.01
SDO1YLR022C TIP1P27654 210 aaPredicted RBP2.48□□□□□ -2.01
SDO1YLR022C ARO4P32449 370 aaKnown RBP2.48□□□□□ -2.01
SDO1YLR022C IES6P32617 166 aa2.48□□□□□ -2.01
SDO1YLR022C HEK2P38199 381 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SDO1YLR022C OST1P41543 476 aaKnown RBP2.48□□□□□ -2.01
SDO1YLR022C PHB2P50085 310 aa2.48□□□□□ -2.01
SDO1YLR022C LST7P53237 242 aa2.48□□□□□ -2.01
SDO1YLR022C SCS7Q03529 384 aa2.48□□□□□ -2.01
SDO1YLR022C YOR214CQ12282 236 aa2.48□□□□□ -2.01
SDO1YLR022C IZH2Q12442 317 aa2.48□□□□□ -2.01
SDO1YLR022C MRX4Q12467 430 aa2.48□□□□□ -2.01
SDO1YLR022C YHR214C-EQ8TGK0 99 aa2.48□□□□□ -2.01
SDO1YLR022C UBA3Q99344 299 aa2.48□□□□□ -2.01
SDO1YLR022C YPR096CO13587 100 aa2.47□□□□□ -2.01
SDO1YLR022C MRP1P10662 321 aaKnown RBP2.47□□□□□ -2.01
SDO1YLR022C NMT1P14743 455 aa2.47□□□□□ -2.01
SDO1YLR022C RPL24BP24000 155 aaKnown RBP2.47□□□□□ -2.01
SDO1YLR022C SUA7P29055 345 aaPredicted RBP2.47□□□□□ -2.01
SDO1YLR022C GDH2P33327 1092 aaKnown RBP2.47□□□□□ -2.01
SDO1YLR022C SWD2P36104 329 aaPredicted RBP2.47□□□□□ -2.01
SDO1YLR022C AIM29P36154 155 aa2.47□□□□□ -2.01
SDO1YLR022C CUE1P38428 203 aa2.47□□□□□ -2.01
SDO1YLR022C YHR035WP38769 630 aa2.47□□□□□ -2.01
SDO1YLR022C GEP4P38812 185 aa2.47□□□□□ -2.01
SDO1YLR022C MST28P39552 234 aa2.47□□□□□ -2.01
SDO1YLR022C KRE29P40026 464 aa2.47□□□□□ -2.01
SDO1YLR022C WWM1P43582 211 aaKnown RBP2.47□□□□□ -2.01
SDO1YLR022C KEG1P43614 200 aa2.47□□□□□ -2.01
SDO1YLR022C YAR1P46683 200 aa2.47□□□□□ -2.01
SDO1YLR022C FMP33P46998 180 aa2.47□□□□□ -2.01
SDO1YLR022C SFH5P47008 294 aa2.47□□□□□ -2.01
SDO1YLR022C AIF1P52923 378 aa2.47□□□□□ -2.01
SDO1YLR022C UFD1P53044 361 aa2.47□□□□□ -2.01
SDO1YLR022C COS6P53344 381 aa2.47□□□□□ -2.01
SDO1YLR022C HXT11P54862 567 aa2.47□□□□□ -2.01
SDO1YLR022C YMR181CQ03231 154 aa2.47□□□□□ -2.01
SDO1YLR022C MRPS17Q03246 237 aaPredicted RBP2.47□□□□□ -2.01
SDO1YLR022C BNA7Q04066 261 aa2.47□□□□□ -2.01
SDO1YLR022C YMR027WQ04371 470 aa2.47□□□□□ -2.01
SDO1YLR022C PAM18Q07914 168 aa2.47□□□□□ -2.01
SDO1YLR022C COX2P00410 251 aa2.46□□□□□ -2.02
SDO1YLR022C FUS3P16892 353 aaKnown RBP2.46□□□□□ -2.02
SDO1YLR022C CBF1P17106 351 aa2.46□□□□□ -2.02
SDO1YLR022C MRPS28P21771 286 aa2.46□□□□□ -2.02
SDO1YLR022C CMK2P22517 447 aa2.46□□□□□ -2.02
SDO1YLR022C PPA2P28239 310 aa2.46□□□□□ -2.02
SDO1YLR022C TCA17P32613 152 aa2.46□□□□□ -2.02
SDO1YLR022C TOA2P32774 122 aa2.46□□□□□ -2.02
SDO1YLR022C ECM34P38728 170 aa2.46□□□□□ -2.02
SDO1YLR022C YHB1P39676 399 aaKnown RBP2.46□□□□□ -2.02
SDO1YLR022C YRB2P40517 327 aa2.46□□□□□ -2.02
SDO1YLR022C FIP1P45976 327 aa2.46□□□□□ -2.02
SDO1YLR022C PAC10P48363 199 aa2.46□□□□□ -2.02
SDO1YLR022C NAS6P50086 228 aa2.46□□□□□ -2.02
SDO1YLR022C NSA1P53136 463 aaPredicted RBP2.46□□□□□ -2.02
SDO1YLR022C TIM21P53220 239 aa2.46□□□□□ -2.02
SDO1YLR022C GTR2P53290 341 aa2.46□□□□□ -2.02
SDO1YLR022C PXR1P53335 271 aaPredicted RBP2.46□□□□□ -2.02
SDO1YLR022C RRN9P53437 365 aa2.46□□□□□ -2.02
SDO1YLR022C YMR209CQ03648 457 aa2.46□□□□□ -2.02
SDO1YLR022C YDR102CQ03864 110 aa2.46□□□□□ -2.02
SDO1YLR022C KRE28Q04431 385 aa2.46□□□□□ -2.02
SDO1YLR022C YMR226CQ05016 267 aaKnown RBP2.46□□□□□ -2.02
SDO1YLR022C MDM36Q06820 579 aa2.46□□□□□ -2.02
SDO1YLR022C ATG31Q12421 196 aa2.46□□□□□ -2.02
SDO1YLR022C TDH3P00359 332 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
SDO1YLR022C ZWF1P11412 505 aaKnown RBP2.45□□□□□ -2.02
SDO1YLR022C NHP6BP11633 99 aaKnown RBP2.45□□□□□ -2.02
SDO1YLR022C ERD2P18414 219 aa2.45□□□□□ -2.02
SDO1YLR022C POP5P28005 173 aa2.45□□□□□ -2.02
SDO1YLR022C CAM1P29547 415 aaKnown RBP2.45□□□□□ -2.02
SDO1YLR022C NUP2P32499 720 aa2.45□□□□□ -2.02
SDO1YLR022C ZUO1P32527 433 aaKnown RBP2.45□□□□□ -2.02
SDO1YLR022C SEC17P32602 292 aa2.45□□□□□ -2.02
SDO1YLR022C ZRT1P32804 376 aa2.45□□□□□ -2.02
SDO1YLR022C ARC19P33204 171 aaKnown RBP2.45□□□□□ -2.02
SDO1YLR022C TIR2P33890 251 aa2.45□□□□□ -2.02
SDO1YLR022C YKL162CP36052 402 aa2.45□□□□□ -2.02
SDO1YLR022C YBR241CP38142 488 aa2.45□□□□□ -2.02
SDO1YLR022C RIB5P38145 238 aa2.45□□□□□ -2.02
SDO1YLR022C IST2P38250 946 aa2.45□□□□□ -2.02
SDO1YLR022C YHK8P38776 514 aa2.45□□□□□ -2.02
SDO1YLR022C AGP3P43548 558 aa2.45□□□□□ -2.02
SDO1YLR022C YJL118WP47022 219 aa2.45□□□□□ -2.02
SDO1YLR022C AIM24P47127 394 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 65.4 ms