RNA–Protein interactions for RNA: YLR014C

PPR1, Transcript of Zinc finger transcription factor, yeast

Gene PPR1, Length 2,715 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PPR1	YLR014C	AST2	P39945	430 aa	Known RBP	4.93	□□□□□ -1.62
PPR1	YLR014C	KRE29	P40026	464 aa		4.93	□□□□□ -1.62
PPR1	YLR014C	RPS12	P48589	143 aa	Known RBP	4.93	□□□□□ -1.62
PPR1	YLR014C	TOS2	P50078	622 aa		4.93	□□□□□ -1.62
PPR1	YLR014C	UBC11	P52492	156 aa		4.93	□□□□□ -1.62
PPR1	YLR014C	UFD1	P53044	361 aa		4.93	□□□□□ -1.62
PPR1	YLR014C	TPC1	P53257	314 aa		4.93	□□□□□ -1.62
PPR1	YLR014C	GRX5	Q02784	150 aa		4.93	□□□□□ -1.62
PPR1	YLR014C	ARR3	Q06598	404 aa		4.93	□□□□□ -1.62
PPR1	YLR014C	PRP11	Q07350	266 aa	Predicted RBP	4.93	□□□□□ -1.62
PPR1	YLR014C	YDL211C	Q12121	372 aa		4.93	□□□□□ -1.62
PPR1	YLR014C	TRM10	Q12400	293 aa		4.93	□□□□□ -1.62
PPR1	YLR014C	YOP1	Q12402	180 aa		4.93	□□□□□ -1.62
PPR1	YLR014C	RDI1	Q12434	202 aa		4.93	□□□□□ -1.62
PPR1	YLR014C	YOL163W	P0CF20	169 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	TFS1	P14306	219 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	ERD1	P16151	362 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	ERS1	P17261	260 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	YOR062C	P36025	268 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	MRPL15	P36523	253 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	ANS1	P38832	159 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	YIA6	P40556	373 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	PKR1	Q03880	122 aa	Known RBP	4.92	□□□□□ -1.62
PPR1	YLR014C	ENB1	Q08299	606 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	PSF1	Q12488	208 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	FOL3	Q12676	427 aa	Predicted RBP	4.92	□□□□□ -1.62
PPR1	YLR014C	HOM6	P31116	359 aa	Known RBP	4.92	□□□□□ -1.62
PPR1	YLR014C	FRM2	P37261	193 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	YJR012C	P47087	207 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	JAC1	P53193	184 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	MPA43	P53583	542 aa	Predicted RBP	4.92	□□□□□ -1.62
PPR1	YLR014C	BOR1	P53838	576 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	CAC2	Q04199	468 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	YPR174C	Q06616	221 aa	Predicted RBP	4.92	□□□□□ -1.62
PPR1	YLR014C	YOR283W	Q12040	230 aa	Known RBP	4.92	□□□□□ -1.62
PPR1	YLR014C	YGK3	Q12222	375 aa	Predicted RBP	4.92	□□□□□ -1.62
PPR1	YLR014C	IRA2	P19158	3079 aa		4.92	□□□□□ -1.62
PPR1	YLR014C	PRE3	P38624	215 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	PMT5	P52867	743 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	MKC7	P53379	596 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	MRPL22	P53881	309 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	FMP42	Q04991	504 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	CBP6	P07253	162 aa	Predicted RBP	4.91	□□□□□ -1.62
PPR1	YLR014C	PEP4	P07267	405 aa	Known RBP	4.91	□□□□□ -1.62
PPR1	YLR014C	BAR1	P12630	587 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	ZRT1	P32804	376 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	MRPS5	P33759	307 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	SDH8	P38345	138 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	CHA4	P43634	648 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	YJR011C	P47086	261 aa	Predicted RBP	4.91	□□□□□ -1.62
PPR1	YLR014C	POP6	P53218	158 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	ASI3	P53983	676 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	NUP53	Q03790	475 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	GAS2	Q06135	555 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	YLR446W	Q06204	433 aa		4.91	□□□□□ -1.62
PPR1	YLR014C	TOR2	P32600	2474 aa	Known RBP	4.91	□□□□□ -1.62
PPR1	YLR014C	SAM35	P14693	329 aa		4.9	□□□□□ -1.62
PPR1	YLR014C	RFC2	P40348	353 aa		4.9	□□□□□ -1.62
PPR1	YLR014C	YMR315W	Q04869	349 aa	Known RBP	4.9	□□□□□ -1.62
PPR1	YLR014C	YLR415C	O13578	112 aa		4.9	□□□□□ -1.63
PPR1	YLR014C	ACB1	P31787	87 aa		4.9	□□□□□ -1.63
PPR1	YLR014C	MRPL24	P36525	258 aa	Predicted RBP	4.9	□□□□□ -1.63
PPR1	YLR014C	ECM34	P38728	170 aa		4.9	□□□□□ -1.63
PPR1	YLR014C	MRPL49	P40858	161 aa	Predicted RBP	4.9	□□□□□ -1.63
PPR1	YLR014C	NAM8	Q00539	523 aa	Known RBP	4.9	□□□□□ -1.63
PPR1	YLR014C	MSS11	Q03825	758 aa		4.9	□□□□□ -1.63
PPR1	YLR014C	SKI7	Q08491	747 aa	Predicted RBP	4.9	□□□□□ -1.63
PPR1	YLR014C	SNU23	Q12368	194 aa	Predicted RBP	4.9	□□□□□ -1.63
PPR1	YLR014C	IPP1	P00817	287 aa	Known RBP	4.89	□□□□□ -1.63
PPR1	YLR014C	RPL12A	P0CX53	165 aa	Known RBP	4.89	□□□□□ -1.63
PPR1	YLR014C	RPL12B	P0CX54	165 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	YCR100C	P25606	316 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	PMT2	P31382	759 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	OAC1	P32332	324 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	APL3	P38065	1025 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	TIF11	P38912	153 aa	Known RBP	4.89	□□□□□ -1.63
PPR1	YLR014C	BAT2	P47176	376 aa	Known RBP	4.89	□□□□□ -1.63
PPR1	YLR014C	MSY1	P48527	492 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	PFA5	Q03289	374 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	MHR1	Q06630	226 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	MRX9	Q07349	420 aa	Known RBP	4.89	□□□□□ -1.63
PPR1	YLR014C	THI72	Q08579	599 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	ADE5,7	P07244	802 aa	Known RBP	4.89	□□□□□ -1.63
PPR1	YLR014C	DDI2	P0CH63	225 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	DDI3	P0CH64	225 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	TOD6	P34219	525 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	ECM15	P35195	104 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	IPI1	P38803	334 aa	Predicted RBP	4.89	□□□□□ -1.63
PPR1	YLR014C	PHO90	P39535	881 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	YLR152C	P54072	576 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	YPL077C	Q02831	240 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	INP1	Q03694	420 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	RAV2	Q03956	351 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	VBA1	Q04301	562 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	ELP6	Q04868	273 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	GEP5	Q12393	293 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	FAS1	P07149	2051 aa	Known RBP	4.89	□□□□□ -1.63
PPR1	YLR014C	HFA1	P32874	2273 aa		4.89	□□□□□ -1.63
PPR1	YLR014C	TRM9	P49957	279 aa		4.88	□□□□□ -1.63
PPR1	YLR014C	YOL162W	P0CF19	215 aa		4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 28.2 ms