RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeastyeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBI4YLL039C RPL31AP0C2H8 113 aaKnown RBP3.94□□□□□ -1.78
UBI4YLL039C RPL31BP0C2H9 113 aaKnown RBP3.94□□□□□ -1.78
UBI4YLL039C SEC12P11655 471 aa3.94□□□□□ -1.78
UBI4YLL039C SEC59P20048 519 aa3.94□□□□□ -1.78
UBI4YLL039C RNA15P25299 296 aaPredicted RBP3.94□□□□□ -1.78
UBI4YLL039C YCL002CP25565 263 aa3.94□□□□□ -1.78
UBI4YLL039C PPA2P28239 310 aa3.94□□□□□ -1.78
UBI4YLL039C EMP24P32803 203 aaKnown RBP3.94□□□□□ -1.78
UBI4YLL039C SHE2P36068 246 aaKnown RBP RIP-Chip data3.94□□□□□ -1.78not detected
UBI4YLL039C MAL32P38158 584 aa3.94□□□□□ -1.78
UBI4YLL039C YPC1P38298 316 aa3.94□□□□□ -1.78
UBI4YLL039C VBA2P38358 474 aaKnown RBP3.94□□□□□ -1.78
UBI4YLL039C MTC6P38849 526 aa3.94□□□□□ -1.78
UBI4YLL039C ASP1P38986 381 aaPredicted RBP3.94□□□□□ -1.78
UBI4YLL039C HPA3P39979 161 aa3.94□□□□□ -1.78
UBI4YLL039C GPP2P40106 250 aaKnown RBP3.94□□□□□ -1.78
UBI4YLL039C RPA34P47006 233 aaPredicted RBP3.94□□□□□ -1.78
UBI4YLL039C SNN1P48232 102 aa3.94□□□□□ -1.78
UBI4YLL039C MAL12P53341 584 aa3.94□□□□□ -1.78
UBI4YLL039C BUD17P53727 317 aa3.94□□□□□ -1.78
UBI4YLL039C MRPL51Q06090 140 aaPredicted RBP3.94□□□□□ -1.78
UBI4YLL039C ATG33Q06485 197 aa3.94□□□□□ -1.78
UBI4YLL039C TAZ1Q06510 381 aa3.94□□□□□ -1.78
UBI4YLL039C YDL180WQ12301 547 aa3.94□□□□□ -1.78
UBI4YLL039C YOL114CQ12322 202 aa3.94□□□□□ -1.78
UBI4YLL039C VMA9Q3E7B6 73 aa3.94□□□□□ -1.78
UBI4YLL039C YDL085C-AQ3E7B7 68 aaKnown RBP3.94□□□□□ -1.78
UBI4YLL039C YEL009C-AA0A023PZF2 135 aa3.93□□□□□ -1.78
UBI4YLL039C OPI3P05375 206 aa3.93□□□□□ -1.78
UBI4YLL039C SIR2P06700 562 aa3.93□□□□□ -1.78
UBI4YLL039C MET2P08465 486 aa3.93□□□□□ -1.78
UBI4YLL039C PRB1P09232 635 aa3.93□□□□□ -1.78
UBI4YLL039C ATP5P09457 212 aa3.93□□□□□ -1.78
UBI4YLL039C NAM2P11325 894 aa3.93□□□□□ -1.78
UBI4YLL039C FRS1P15624 595 aaKnown RBP3.93□□□□□ -1.78
UBI4YLL039C IFM1P25038 676 aa3.93□□□□□ -1.78
UBI4YLL039C RNA14P25298 677 aaKnown RBP3.93□□□□□ -1.78
UBI4YLL039C YCR061WP25639 631 aa3.93□□□□□ -1.78
UBI4YLL039C RNP1P32385 249 aa3.93□□□□□ -1.78
UBI4YLL039C DAL3P32459 195 aa3.93□□□□□ -1.78
UBI4YLL039C TMA19P35691 167 aaKnown RBP3.93□□□□□ -1.78
UBI4YLL039C TCM62P38228 572 aaKnown RBP3.93□□□□□ -1.78
UBI4YLL039C PHO90P39535 881 aa3.93□□□□□ -1.78
UBI4YLL039C UIP3P39547 235 aa3.93□□□□□ -1.78
UBI4YLL039C AIM10P39965 576 aaKnown RBP3.93□□□□□ -1.78
UBI4YLL039C PFS2P42841 465 aaKnown RBP3.93□□□□□ -1.78
UBI4YLL039C SFH5P47008 294 aa3.93□□□□□ -1.78
UBI4YLL039C TIM21P53220 239 aa3.93□□□□□ -1.78
UBI4YLL039C PCP1P53259 346 aa3.93□□□□□ -1.78
UBI4YLL039C VOA1P53262 265 aa3.93□□□□□ -1.78
UBI4YLL039C INN1P53901 409 aa3.93□□□□□ -1.78
UBI4YLL039C LAP3Q01532 483 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
UBI4YLL039C YDR102CQ03864 110 aa3.93□□□□□ -1.78
UBI4YLL039C YMR315WQ04869 349 aaKnown RBP3.93□□□□□ -1.78
UBI4YLL039C CTS2Q06350 511 aa3.93□□□□□ -1.78
UBI4YLL039C ATX2Q12067 313 aa3.93□□□□□ -1.78
UBI4YLL039C PAA1Q12447 191 aaKnown RBP3.93□□□□□ -1.78
UBI4YLL039C ERP4Q12450 207 aa3.93□□□□□ -1.78
UBI4YLL039C FOL3Q12676 427 aaPredicted RBP3.93□□□□□ -1.78
UBI4YLL039C BPH1P25356 2167 aa3.93□□□□□ -1.78
UBI4YLL039C RPS16AP0CX51 143 aaKnown RBP3.92□□□□□ -1.78
UBI4YLL039C RPS16BP0CX52 143 aaKnown RBP3.92□□□□□ -1.78
UBI4YLL039C SPO7P18410 259 aa3.92□□□□□ -1.78
UBI4YLL039C RPI1P23250 407 aaKnown RBP3.92□□□□□ -1.78
UBI4YLL039C CPR2P23285 205 aa3.92□□□□□ -1.78
UBI4YLL039C EXG1P23776 448 aaKnown RBP3.92□□□□□ -1.78
UBI4YLL039C STE50P25344 346 aa3.92□□□□□ -1.78
UBI4YLL039C ATG15P25641 520 aa3.92□□□□□ -1.78
UBI4YLL039C ECT1P33412 323 aa3.92□□□□□ -1.78
UBI4YLL039C SSS1P35179 80 aa3.92□□□□□ -1.78
UBI4YLL039C MRPL4P36517 319 aa3.92□□□□□ -1.78
UBI4YLL039C SHE1P38200 338 aa3.92□□□□□ -1.78
UBI4YLL039C YHL037CP38733 133 aa3.92□□□□□ -1.78
UBI4YLL039C YHR035WP38769 630 aa3.92□□□□□ -1.78
UBI4YLL039C PKP2P53170 491 aa3.92□□□□□ -1.78
UBI4YLL039C RSM27P53305 110 aa3.92□□□□□ -1.78
UBI4YLL039C HCH1P53834 153 aa3.92□□□□□ -1.78
UBI4YLL039C MRP51Q02950 344 aa3.92□□□□□ -1.78
UBI4YLL039C ATC1Q04005 294 aa3.92□□□□□ -1.78
UBI4YLL039C YDR387CQ04162 555 aa3.92□□□□□ -1.78
UBI4YLL039C CUE4Q04201 117 aaPredicted RBP3.92□□□□□ -1.78
UBI4YLL039C FIT1Q04433 528 aa3.92□□□□□ -1.78
UBI4YLL039C MRPL35Q06678 367 aa3.92□□□□□ -1.78
UBI4YLL039C MCH4Q08268 501 aa3.92□□□□□ -1.78
UBI4YLL039C MSW1P04803 379 aa3.91□□□□□ -1.78
UBI4YLL039C KIN28P06242 306 aa3.91□□□□□ -1.78
UBI4YLL039C ADH3P07246 375 aaKnown RBP3.91□□□□□ -1.78
UBI4YLL039C FUN19P28003 413 aaPredicted RBP3.91□□□□□ -1.78
UBI4YLL039C MRP17P28778 131 aa3.91□□□□□ -1.78
UBI4YLL039C SFK1P35735 353 aa3.91□□□□□ -1.78
UBI4YLL039C AIM29P36154 155 aa3.91□□□□□ -1.78
UBI4YLL039C FLO10P36170 1169 aa3.91□□□□□ -1.78
UBI4YLL039C ATG8P38182 117 aaRIP-Chip data3.91□□□□□ -1.78not detected
UBI4YLL039C ARO9P38840 513 aaPredicted RBP3.91□□□□□ -1.78
UBI4YLL039C SDP1P40479 209 aa3.91□□□□□ -1.78
UBI4YLL039C PAU15P40585 124 aa3.91□□□□□ -1.78
UBI4YLL039C MTL1P53214 551 aa3.91□□□□□ -1.78
UBI4YLL039C SMX3P54999 86 aaPredicted RBP3.91□□□□□ -1.78
UBI4YLL039C RCE1Q03530 315 aa3.91□□□□□ -1.78
UBI4YLL039C API2Q04413 109 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms