RNA–Protein interactions for RNA: YKR100C

SKG1, Transcript of Transmembrane protein with a role in cell wall polymer composition, yeast

Gene SKG1, Length 1,068 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKG1	YKR100C	PTC1	P35182	281 aa		3.5	□□□□□ -1.85
SKG1	YKR100C	SLM1	P40485	686 aa		3.5	□□□□□ -1.85
SKG1	YKR100C	GET1	P53192	235 aa		3.5	□□□□□ -1.85
SKG1	YKR100C	RNH201	P53942	307 aa		3.5	□□□□□ -1.85
SKG1	YKR100C	RMI1	Q02685	241 aa		3.5	□□□□□ -1.85
SKG1	YKR100C	MET31	Q03081	177 aa		3.5	□□□□□ -1.85
SKG1	YKR100C	NAT4	Q04751	285 aa		3.5	□□□□□ -1.85
SKG1	YKR100C	HOR7	Q05827	59 aa		3.5	□□□□□ -1.85
SKG1	YKR100C	ATO3	Q12359	275 aa		3.5	□□□□□ -1.85
SKG1	YKR100C	CUP2	P15315	225 aa		3.49	□□□□□ -1.85
SKG1	YKR100C	SAG1	P20840	650 aa		3.49	□□□□□ -1.85
SKG1	YKR100C	RIB1	P38066	345 aa		3.49	□□□□□ -1.85
SKG1	YKR100C	ARR2	Q06597	130 aa		3.49	□□□□□ -1.85
SKG1	YKR100C	RRS1	Q08746	203 aa	Known RBP	3.49	□□□□□ -1.85
SKG1	YKR100C	RRT13	P40042	185 aa		3.48	□□□□□ -1.85
SKG1	YKR100C	FLX1	P40464	311 aa		3.48	□□□□□ -1.85
SKG1	YKR100C	YDR391C	Q04170	232 aa		3.48	□□□□□ -1.85
SKG1	YKR100C	PRM3	Q08931	133 aa		3.48	□□□□□ -1.85
SKG1	YKR100C	RAD1	P06777	1100 aa		3.47	□□□□□ -1.85
SKG1	YKR100C	RRP7	P25368	297 aa	Predicted RBP	3.47	□□□□□ -1.85
SKG1	YKR100C	MGT1	P26188	188 aa		3.47	□□□□□ -1.85
SKG1	YKR100C	INO2	P26798	304 aa		3.47	□□□□□ -1.85
SKG1	YKR100C	TRS20	P38334	175 aa		3.47	□□□□□ -1.85
SKG1	YKR100C	ATG7	P38862	630 aa		3.47	□□□□□ -1.85
SKG1	YKR100C	HST4	P53688	370 aa		3.47	□□□□□ -1.85
SKG1	YKR100C	MRX11	Q03079	207 aa		3.47	□□□□□ -1.85
SKG1	YKR100C	YDR102C	Q03864	110 aa		3.47	□□□□□ -1.85
SKG1	YKR100C	MDY2	Q12285	212 aa		3.47	□□□□□ -1.85
SKG1	YKR100C	DDP1	Q99321	188 aa	Known RBP	3.47	□□□□□ -1.85
SKG1	YKR100C	RPL23A	P0CX41	137 aa	Known RBP	3.46	□□□□□ -1.86
SKG1	YKR100C	RPL23B	P0CX42	137 aa	Known RBP	3.46	□□□□□ -1.86
SKG1	YKR100C	GRX2	P17695	143 aa	Known RBP	3.46	□□□□□ -1.86
SKG1	YKR100C	CAM1	P29547	415 aa	Known RBP	3.46	□□□□□ -1.86
SKG1	YKR100C	AGA2	P32781	87 aa		3.46	□□□□□ -1.86
SKG1	YKR100C	SHE1	P38200	338 aa		3.46	□□□□□ -1.86
SKG1	YKR100C	KRE29	P40026	464 aa		3.46	□□□□□ -1.86
SKG1	YKR100C	LYS12	P40495	371 aa	Known RBP	3.46	□□□□□ -1.86
SKG1	YKR100C	VPS55	P47111	140 aa		3.46	□□□□□ -1.86
SKG1	YKR100C	YPT32	P51996	222 aa	Known RBP	3.46	□□□□□ -1.86
SKG1	YKR100C	YGL114W	P53134	725 aa		3.46	□□□□□ -1.86
SKG1	YKR100C	YOL019W	Q08157	551 aa		3.46	□□□□□ -1.86
SKG1	YKR100C	PHO85	P17157	305 aa		3.45	□□□□□ -1.86
SKG1	YKR100C	YJL055W	P47044	245 aa		3.45	□□□□□ -1.86
SKG1	YKR100C	YLR462W	O13556	202 aa		3.44	□□□□□ -1.86
SKG1	YKR100C	YCR087C-A	P37263	153 aa		3.44	□□□□□ -1.86
SKG1	YKR100C	YHL049C	P38722	271 aa		3.44	□□□□□ -1.86
SKG1	YKR100C	STB1	P42845	420 aa		3.44	□□□□□ -1.86
SKG1	YKR100C	EFM5	P53200	248 aa	Known RBP	3.44	□□□□□ -1.86
SKG1	YKR100C	BTS1	Q12051	335 aa		3.44	□□□□□ -1.86
SKG1	YKR100C	RPN5	Q12250	445 aa	Known RBP	3.44	□□□□□ -1.86
SKG1	YKR100C	CBP2	P03874	630 aa	Predicted RBP	3.43	□□□□□ -1.86
SKG1	YKR100C	SUR1	P33300	382 aa		3.43	□□□□□ -1.86
SKG1	YKR100C	YMR134W	P40207	237 aa		3.43	□□□□□ -1.86
SKG1	YKR100C	SEC28	P40509	296 aa	Known RBP	3.43	□□□□□ -1.86
SKG1	YKR100C	YIR035C	P40579	254 aa		3.43	□□□□□ -1.86
SKG1	YKR100C	MRPL49	P40858	161 aa	Predicted RBP	3.43	□□□□□ -1.86
SKG1	YKR100C	FMP32	P43557	207 aa		3.43	□□□□□ -1.86
SKG1	YKR100C	SLT2	Q00772	484 aa		3.43	□□□□□ -1.86
SKG1	YKR100C	HPT1	Q04178	221 aa	Known RBP	3.43	□□□□□ -1.86
SKG1	YKR100C	LCL2	Q08045	131 aa		3.43	□□□□□ -1.86
SKG1	YKR100C	YOR029W	Q12243	111 aa		3.43	□□□□□ -1.86
SKG1	YKR100C	YOR343C	Q12484	108 aa		3.43	□□□□□ -1.86
SKG1	YKR100C	YAL067W-A	Q8TGK6	75 aa		3.43	□□□□□ -1.86
SKG1	YKR100C	YMR105W-A	Q8TGS8	64 aa		3.43	□□□□□ -1.86
SKG1	YKR100C	MIR1	P23641	311 aa	Known RBP	3.42	□□□□□ -1.86
SKG1	YKR100C	YBR096W	P38256	230 aa		3.42	□□□□□ -1.86
SKG1	YKR100C	RCF2	P53721	224 aa		3.42	□□□□□ -1.86
SKG1	YKR100C	DIA1	P54005	336 aa		3.42	□□□□□ -1.86
SKG1	YKR100C	YDC1	Q02896	317 aa		3.42	□□□□□ -1.86
SKG1	YKR100C	RCF1	Q03713	159 aa		3.42	□□□□□ -1.86
SKG1	YKR100C	YOR214C	Q12282	236 aa		3.42	□□□□□ -1.86
SKG1	YKR100C	RPS1A	P33442	255 aa	Known RBP	3.41	□□□□□ -1.86
SKG1	YKR100C	MPC2	P38857	129 aa		3.41	□□□□□ -1.86
SKG1	YKR100C	MRX8	Q05473	314 aa		3.41	□□□□□ -1.86
SKG1	YKR100C	APC2	Q12440	853 aa		3.41	□□□□□ -1.86
SKG1	YKR100C	YPL247C	Q12523	523 aa		3.41	□□□□□ -1.86
SKG1	YKR100C	FUS3	P16892	353 aa	Known RBP	3.4	□□□□□ -1.87
SKG1	YKR100C	FRM2	P37261	193 aa		3.4	□□□□□ -1.87
SKG1	YKR100C	MLH1	P38920	769 aa		3.4	□□□□□ -1.87
SKG1	YKR100C	END3	P39013	349 aa		3.4	□□□□□ -1.87
SKG1	YKR100C	LCP5	P40079	357 aa	Predicted RBP	3.4	□□□□□ -1.87
SKG1	YKR100C	EFM4	P40516	257 aa		3.4	□□□□□ -1.87
SKG1	YKR100C	YHP1	Q04116	353 aa		3.4	□□□□□ -1.87
SKG1	YKR100C	AST1	P35183	429 aa		3.39	□□□□□ -1.87
SKG1	YKR100C	PRS4	P38063	326 aa	Predicted RBP	3.39	□□□□□ -1.87
SKG1	YKR100C	SSH1	P38353	490 aa	Known RBP	3.39	□□□□□ -1.87
SKG1	YKR100C	COS6	P53344	381 aa		3.39	□□□□□ -1.87
SKG1	YKR100C	YDR114C	Q04597	100 aa		3.39	□□□□□ -1.87
SKG1	YKR100C	TDH2	P00358	332 aa	Known RBP	3.38	□□□□□ -1.87
SKG1	YKR100C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.38	□□□□□ -1.87	not detected
SKG1	YKR100C	ERD2	P18414	219 aa		3.38	□□□□□ -1.87
SKG1	YKR100C	CAT2	P32796	670 aa	Known RBP	3.38	□□□□□ -1.87
SKG1	YKR100C	MDL1	P33310	695 aa		3.38	□□□□□ -1.87
SKG1	YKR100C	ECM33	P38248	429 aa	Known RBP	3.38	□□□□□ -1.87
SKG1	YKR100C	CAJ1	P39101	391 aa		3.38	□□□□□ -1.87
SKG1	YKR100C	CSN9	Q03981	162 aa		3.38	□□□□□ -1.87
SKG1	YKR100C	YPR096C	O13587	100 aa		3.37	□□□□□ -1.87
SKG1	YKR100C	HSP30	P25619	332 aa		3.37	□□□□□ -1.87
SKG1	YKR100C	YKR015C	P36111	568 aa		3.37	□□□□□ -1.87
SKG1	YKR100C	GDI1	P39958	451 aa	Known RBP	3.37	□□□□□ -1.87

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms