RNA–Protein interactions for RNA: YKR017C

HEL1, Transcript of RING finger ubiquitin ligase (E3), yeastyeast

Gene HEL1, Length 1,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HEL1YKR017C MIT1P40002 666 aa6.23□□□□□ -1.41
HEL1YKR017C YFR020WP43600 232 aa6.23□□□□□ -1.41
HEL1YKR017C UBC9P50623 157 aaPredicted RBP6.23□□□□□ -1.41
HEL1YKR017C NMA2P53204 395 aa6.23□□□□□ -1.41
HEL1YKR017C BUD9P53226 547 aa6.23□□□□□ -1.41
HEL1YKR017C YGR168CP53293 376 aa6.23□□□□□ -1.41
HEL1YKR017C AAH1P53909 347 aa6.23□□□□□ -1.41
HEL1YKR017C THI74Q04083 370 aa6.23□□□□□ -1.41
HEL1YKR017C GRH1Q04410 372 aaKnown RBP6.23□□□□□ -1.41
HEL1YKR017C MCP1Q12106 302 aa6.23□□□□□ -1.41
HEL1YKR017C WTM2Q12206 467 aa6.23□□□□□ -1.41
HEL1YKR017C ADH3P07246 375 aaKnown RBP6.23□□□□□ -1.41
HEL1YKR017C CDC26P14724 124 aa6.23□□□□□ -1.41
HEL1YKR017C VMA3P25515 160 aa6.23□□□□□ -1.41
HEL1YKR017C FEN2P25621 512 aaKnown RBP6.23□□□□□ -1.41
HEL1YKR017C ATG15P25641 520 aa6.23□□□□□ -1.41
HEL1YKR017C OAC1P32332 324 aa6.23□□□□□ -1.41
HEL1YKR017C REC114P32841 428 aa6.23□□□□□ -1.41
HEL1YKR017C YBR032WP38223 100 aa6.23□□□□□ -1.41
HEL1YKR017C YHL049CP38722 271 aa6.23□□□□□ -1.41
HEL1YKR017C MDM31P38880 579 aa6.23□□□□□ -1.41
HEL1YKR017C IPT1P38954 527 aa6.23□□□□□ -1.41
HEL1YKR017C GAA1P39012 614 aa6.23□□□□□ -1.41
HEL1YKR017C YJL193WP39542 402 aa6.23□□□□□ -1.41
HEL1YKR017C YMR144WP40214 342 aaKnown RBP6.23□□□□□ -1.41
HEL1YKR017C BUD13P46947 266 aaPredicted RBP6.23□□□□□ -1.41
HEL1YKR017C AVT1P47082 602 aa6.23□□□□□ -1.41
HEL1YKR017C UBC11P52492 156 aa6.23□□□□□ -1.41
HEL1YKR017C YGR015CP53208 328 aa6.23□□□□□ -1.41
HEL1YKR017C CLD1P53264 445 aa6.23□□□□□ -1.41
HEL1YKR017C YNR048WP53740 393 aa6.23□□□□□ -1.41
HEL1YKR017C CSL4P53859 292 aaPredicted RBP6.23□□□□□ -1.41
HEL1YKR017C AIM11P87275 137 aa6.23□□□□□ -1.41
HEL1YKR017C BSP1Q06604 576 aa6.23□□□□□ -1.41
HEL1YKR017C SNX3Q08826 162 aaKnown RBP6.23□□□□□ -1.41
HEL1YKR017C PDR15Q04182 1529 aaKnown RBP6.22□□□□□ -1.41
HEL1YKR017C RAS1P01119 309 aa6.22□□□□□ -1.41
HEL1YKR017C CHO1P08456 276 aa6.22□□□□□ -1.41
HEL1YKR017C YEL076C-AP0CX16 216 aa6.22□□□□□ -1.41
HEL1YKR017C YLR464WP0CX17 216 aa6.22□□□□□ -1.41
HEL1YKR017C ERG8P24521 451 aa6.22□□□□□ -1.41
HEL1YKR017C SPS18P32572 300 aa6.22□□□□□ -1.41
HEL1YKR017C NTF2P33331 125 aaKnown RBP6.22□□□□□ -1.41
HEL1YKR017C KTR3P38130 404 aaPredicted RBP6.22□□□□□ -1.41
HEL1YKR017C FAA2P39518 744 aa6.22□□□□□ -1.41
HEL1YKR017C YEL076CP39971 216 aa6.22□□□□□ -1.41
HEL1YKR017C SPC25P40014 221 aa6.22□□□□□ -1.41
HEL1YKR017C AIR1P40507 360 aaKnown RBP6.22□□□□□ -1.41
HEL1YKR017C YLR030WQ07967 263 aa6.22□□□□□ -1.41
HEL1YKR017C TY4B-HP0C2J7 1802 aa6.22□□□□□ -1.41
HEL1YKR017C PAI3P01094 68 aa6.21□□□□□ -1.42
HEL1YKR017C AAC1P04710 309 aa6.21□□□□□ -1.42
HEL1YKR017C ATG8P38182 117 aaRIP-Chip data6.21□□□□□ -1.42not detected
HEL1YKR017C GEP4P38812 185 aa6.21□□□□□ -1.42
HEL1YKR017C VEL1P53058 206 aa6.21□□□□□ -1.42
HEL1YKR017C APJ1P53940 528 aa6.21□□□□□ -1.42
HEL1YKR017C SCW10Q04951 389 aa6.21□□□□□ -1.42
HEL1YKR017C TRI1Q05024 226 aa6.21□□□□□ -1.42
HEL1YKR017C COQ11Q05892 277 aa6.21□□□□□ -1.42
HEL1YKR017C HRI1Q05905 244 aaKnown RBP6.21□□□□□ -1.42
HEL1YKR017C TAZ1Q06510 381 aa6.21□□□□□ -1.42
HEL1YKR017C CSI2Q08054 341 aa6.21□□□□□ -1.42
HEL1YKR017C Q0182Q9ZZW1 134 aa6.21□□□□□ -1.42
HEL1YKR017C BI2P03873 423 aa6.2□□□□□ -1.42
HEL1YKR017C TPK3P05986 398 aa6.2□□□□□ -1.42
HEL1YKR017C SNF4P12904 322 aa6.2□□□□□ -1.42
HEL1YKR017C ERS1P17261 260 aa6.2□□□□□ -1.42
HEL1YKR017C YBR241CP38142 488 aa6.2□□□□□ -1.42
HEL1YKR017C SWM2P40342 146 aa6.2□□□□□ -1.42
HEL1YKR017C MCM22P47167 239 aa6.2□□□□□ -1.42
HEL1YKR017C ERG25P53045 309 aa6.2□□□□□ -1.42
HEL1YKR017C YGL230CP53074 147 aa6.2□□□□□ -1.42
HEL1YKR017C SAY1P53324 424 aa6.2□□□□□ -1.42
HEL1YKR017C GPI15P53961 229 aa6.2□□□□□ -1.42
HEL1YKR017C RCE1Q03530 315 aa6.2□□□□□ -1.42
HEL1YKR017C CTR3Q06686 241 aa6.2□□□□□ -1.42
HEL1YKR017C SWC7Q06707 132 aa6.2□□□□□ -1.42
HEL1YKR017C YOL131WQ08270 108 aa6.2□□□□□ -1.42
HEL1YKR017C RPL7BQ12213 244 aaKnown RBP6.2□□□□□ -1.42
HEL1YKR017C ORT1Q12375 292 aa6.2□□□□□ -1.42
HEL1YKR017C YNR034W-AQ3E841 98 aa6.2□□□□□ -1.42
HEL1YKR017C YLR415CO13578 112 aa6.2□□□□□ -1.42
HEL1YKR017C MSW1P04803 379 aa6.2□□□□□ -1.42
HEL1YKR017C RPB3P16370 318 aaKnown RBP6.2□□□□□ -1.42
HEL1YKR017C SLM5P25345 492 aaKnown RBP6.2□□□□□ -1.42
HEL1YKR017C YCR102CP25608 368 aa6.2□□□□□ -1.42
HEL1YKR017C TAH1P25638 111 aaPredicted RBP6.2□□□□□ -1.42
HEL1YKR017C EMC3P36039 253 aa6.2□□□□□ -1.42
HEL1YKR017C SHB17P36136 271 aaKnown RBP6.2□□□□□ -1.42
HEL1YKR017C PRE5P40302 234 aaKnown RBP6.2□□□□□ -1.42
HEL1YKR017C CTR1P49573 406 aa6.2□□□□□ -1.42
HEL1YKR017C COF1Q03048 143 aaKnown RBP6.2□□□□□ -1.42
HEL1YKR017C YMR178WQ03219 274 aaKnown RBP6.2□□□□□ -1.42
HEL1YKR017C YPR145C-AQ2V2P0 78 aa6.2□□□□□ -1.42
HEL1YKR017C DUR1,2P32528 1835 aaKnown RBP6.2□□□□□ -1.42
HEL1YKR017C VTH1P40438 1549 aa6.19□□□□□ -1.42
HEL1YKR017C VTH2P40890 1549 aa6.19□□□□□ -1.42
HEL1YKR017C YEL009C-AA0A023PZF2 135 aa6.19□□□□□ -1.42
HEL1YKR017C HIS1P00498 297 aaKnown RBP6.19□□□□□ -1.42
HEL1YKR017C RAD52P06778 471 aaKnown RBP6.19□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 75.2 ms