RNA–Protein interactions for RNA: YKR002W

PAP1, Transcript of Poly(A) polymerase, yeast

Gene PAP1, Length 1,707 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PAP1	YKR002W	YCR101C	P25607	182 aa		4.81	□□□□□ -1.64
PAP1	YKR002W	YET1	P35723	206 aa		4.81	□□□□□ -1.64
PAP1	YKR002W	CAF4	P36130	643 aa		4.81	□□□□□ -1.64
PAP1	YKR002W	FRT2	P39734	528 aa		4.81	□□□□□ -1.64
PAP1	YKR002W	KRE29	P40026	464 aa		4.81	□□□□□ -1.64
PAP1	YKR002W	REE1	P40893	198 aa		4.81	□□□□□ -1.64
PAP1	YKR002W	FMP48	P53233	369 aa		4.81	□□□□□ -1.64
PAP1	YKR002W	YLR152C	P54072	576 aa		4.81	□□□□□ -1.64
PAP1	YKR002W	RHO3	Q00245	231 aa	Known RBP	4.81	□□□□□ -1.64
PAP1	YKR002W	YDR249C	Q03787	373 aa		4.81	□□□□□ -1.64
PAP1	YKR002W	YCL001W-B	Q96VH2	84 aa		4.81	□□□□□ -1.64
PAP1	YKR002W	YRF1-2	P40105	1681 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	ASP3-2	P0CX77	362 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	ASP3-3	P0CX78	362 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	ASP3-4	P0CX79	362 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	ASP3-1	P0CZ17	362 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	NSP1	P14907	823 aa	Known RBP	4.8	□□□□□ -1.64
PAP1	YKR002W	WSC4	P38739	605 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	PTH1	P38876	190 aa	Known RBP	4.8	□□□□□ -1.64
PAP1	YKR002W	COS4	P43542	379 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	YJR141W	P47172	347 aa	Predicted RBP	4.8	□□□□□ -1.64
PAP1	YKR002W	PRP24	P49960	444 aa	Known RBP	4.8	□□□□□ -1.64
PAP1	YKR002W	YIP3	P53633	176 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	NHP10	Q03435	203 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	VHS1	Q03785	461 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	PEX10	Q05568	337 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	SEI1	Q06058	285 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	BCK1	Q01389	1478 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	PPH21	P23594	369 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	SRY1	P36007	326 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	YBR032W	P38223	100 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	YHR127W	P38833	243 aa	Known RBP	4.8	□□□□□ -1.64
PAP1	YKR002W	TIM17	P39515	158 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	GTT1	P40582	234 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	YPL113C	Q02961	396 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	YET2	Q04210	160 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	HRI1	Q05905	244 aa	Known RBP	4.8	□□□□□ -1.64
PAP1	YKR002W	DGK1	Q12382	290 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	YHR213W-A	Q8TGT4	77 aa		4.8	□□□□□ -1.64
PAP1	YKR002W	RPL25	P04456	142 aa	Known RBP	4.79	□□□□□ -1.64
PAP1	YKR002W	RPL22A	P05749	121 aa	Known RBP	4.79	□□□□□ -1.64
PAP1	YKR002W	YKR104W	P0CE69	306 aa		4.79	□□□□□ -1.64
PAP1	YKR002W	SNF6	P18888	332 aa		4.79	□□□□□ -1.64
PAP1	YKR002W	KRE9	P39005	276 aa		4.79	□□□□□ -1.64
PAP1	YKR002W	OXA1	P39952	402 aa		4.79	□□□□□ -1.64
PAP1	YKR002W	OST3	P48439	350 aa		4.79	□□□□□ -1.64
PAP1	YKR002W	NSA1	P53136	463 aa	Predicted RBP	4.79	□□□□□ -1.64
PAP1	YKR002W	SYF2	P53277	215 aa	Predicted RBP	4.79	□□□□□ -1.64
PAP1	YKR002W	SPG4	Q04438	115 aa		4.79	□□□□□ -1.64
PAP1	YKR002W	FEX1	Q08913	375 aa		4.79	□□□□□ -1.64
PAP1	YKR002W	YPL278C	Q08990	100 aa		4.79	□□□□□ -1.64
PAP1	YKR002W	TPO4	Q12256	659 aa		4.79	□□□□□ -1.64
PAP1	YKR002W	SPT14	P32363	452 aa		4.78	□□□□□ -1.64
PAP1	YKR002W	YGL159W	P53110	370 aa		4.78	□□□□□ -1.64
PAP1	YKR002W	AKR2	Q12013	749 aa		4.78	□□□□□ -1.64
PAP1	YKR002W	YDR018C	Q12185	396 aa		4.78	□□□□□ -1.64
PAP1	YKR002W	YOR214C	Q12282	236 aa		4.78	□□□□□ -1.64
PAP1	YKR002W	YAL063C-A	Q3E791	96 aa		4.78	□□□□□ -1.64
PAP1	YKR002W	CNB1	P25296	175 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	SGE1	P33335	543 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	TRM5	P38793	499 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	POG1	P40473	351 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	CIN5	P40917	295 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	YJL016W	P47072	561 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	ARL3	Q02804	198 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	NDD1	Q08887	554 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	RPL21B	Q12672	160 aa	Known RBP	4.77	□□□□□ -1.65
PAP1	YKR002W	FBA1	P14540	359 aa	Known RBP	4.77	□□□□□ -1.65
PAP1	YKR002W	BGL2	P15703	313 aa	Known RBP	4.77	□□□□□ -1.65
PAP1	YKR002W	SKG1	P36169	355 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	YCR087C-A	P37263	153 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	SEO1	P39709	593 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	MCM22	P47167	239 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	YDR476C	Q03362	224 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	HEM25	Q07534	307 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	PPT2	Q12036	173 aa		4.77	□□□□□ -1.65
PAP1	YKR002W	BUD3	P25558	1636 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	COS2	P0CX12	379 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	COS3	P0CX13	379 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	GRX2	P17695	143 aa	Known RBP	4.76	□□□□□ -1.65
PAP1	YKR002W	SPS18	P32572	300 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	SUI1	P32911	108 aa	Known RBP	4.76	□□□□□ -1.65
PAP1	YKR002W	YER121W	P40076	114 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	SOK1	P40317	901 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	IRC18	P47056	224 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	YGL034C	P53186	121 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	COG7	P53195	279 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	FMN1	Q03778	218 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	IRC25	Q07951	179 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	FEX2	Q08991	375 aa		4.76	□□□□□ -1.65
PAP1	YKR002W	YMR316C-A	I2HB70	103 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	URA6	P15700	204 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	CAM1	P29547	415 aa	Known RBP	4.75	□□□□□ -1.65
PAP1	YKR002W	YBL059W	P34224	193 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	MRPL3	P36516	390 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	PDX3	P38075	228 aa	Known RBP	4.75	□□□□□ -1.65
PAP1	YKR002W	MIG3	P39943	394 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	UFE1	P41834	346 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	RPE1	P46969	238 aa		4.75	□□□□□ -1.65
PAP1	YKR002W	BRR6	P53062	197 aa		4.75	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 154.7 ms