RNA–Protein interactions for RNA: YJL041W

NSP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NSP1, Length 2,472 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSP1	YJL041W	ADH7	P25377	361 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	ARO4	P32449	370 aa	Known RBP	3.15	□□□□□ -1.91
NSP1	YJL041W	EMP70	P32802	667 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	MTR2	P34232	184 aa	Known RBP	3.15	□□□□□ -1.91
NSP1	YJL041W	MAC1	P35192	417 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	PAN3	P36102	679 aa	Predicted RBP	3.15	□□□□□ -1.91
NSP1	YJL041W	GPP2	P40106	250 aa	Known RBP	3.15	□□□□□ -1.91
NSP1	YJL041W	URM1	P40554	99 aa	Predicted RBP	3.15	□□□□□ -1.91
NSP1	YJL041W	PHS1	P40857	217 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	YJL163C	P46996	555 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	SFH5	P47008	294 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	YJR120W	P47157	116 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	YNL092W	P53934	400 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	AIM11	P87275	137 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	TPS1	Q00764	495 aa	Known RBP	3.15	□□□□□ -1.91
NSP1	YJL041W	SNO4	Q04902	237 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	YML053C	Q04978	212 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	BSP1	Q06604	576 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	YFH1	Q07540	174 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	HSP32	Q08992	237 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	FCY22	Q12119	530 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	RKM5	Q12367	367 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	YLR412C-A	Q3E742	68 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	TFB5	Q3E7C1	72 aa	Predicted RBP	3.15	□□□□□ -1.91
NSP1	YJL041W	BI3	Q9ZZW7	517 aa		3.15	□□□□□ -1.91
NSP1	YJL041W	MBF1	O14467	151 aa	Known RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	MES1	P00958	751 aa	Known RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	RPL40A	P0CH08	128 aa	Known RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	RPL40B	P0CH09	128 aa	Known RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	PBI2	P0CT04	75 aa	Known RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	POX1	P13711	748 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	DPM1	P14020	267 aa	Known RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	RPB8	P20436	146 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	POT1	P27796	417 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
NSP1	YJL041W	RAD23	P32628	398 aa	Known RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	YKR041W	P36134	250 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	ASC1	P38011	319 aa	Known RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	YHR097C	P38809	366 aa	Known RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	PET130	P47065	347 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	MIC26	P50087	233 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	UBC9	P50623	157 aa	Predicted RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	GIP3	Q03016	1276 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	SEC13	Q04491	297 aa	Known RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	COQ11	Q05892	277 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	SKG3	Q06315	1026 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	TAZ1	Q06510	381 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	RXT3	Q07458	294 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	YLR030W	Q07967	263 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	YOR385W	Q08909	290 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	YGL194C-A	Q2V2P6	80 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	YCR075W-A	Q3E830	75 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	FLO1	P32768	1537 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	GLN3	P18494	730 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	PCL1	P24867	279 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	ZRT1	P32804	376 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	PAU16	P35994	123 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	MIX23	P38162	196 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	YHR122W	P38829	231 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	ACA1	P39970	489 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	PAU5	P43575	122 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	STE24	P47154	453 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	COX18	P53239	316 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	PDR17	P53844	350 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	ACT1	P60010	375 aa	Known RBP	3.14	□□□□□ -1.91
NSP1	YJL041W	PLB2	Q03674	706 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	YHM2	Q04013	314 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	MRPL35	Q06678	367 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	YLR040C	Q07988	224 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	THP1	Q08231	455 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	NUS1	Q12063	375 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	SIA1	Q12212	622 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	SWM1	Q12379	170 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	YIL134C-A	Q45U18	67 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	ATG40	Q99325	256 aa		3.14	□□□□□ -1.91
NSP1	YJL041W	COX2	P00410	251 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	AAC1	P04710	309 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	COX10	P21592	462 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	MAK32	P23060	363 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	MIH1	P23748	554 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	MGT1	P26188	188 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	MRP17	P28778	131 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	MCR1	P36060	302 aa	Known RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	MRPL11	P36521	249 aa	Predicted RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	YBR096W	P38256	230 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	AIM3	P38266	947 aa	Known RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	EHT1	P38295	451 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	PHO89	P38361	574 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	TTI2	P47168	421 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	RMD9	P53140	646 aa	Known RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	TAM41	P53230	385 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	RPS15	Q01855	142 aa	Known RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	YMR178W	Q03219	274 aa	Known RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	TGL5	Q12043	749 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	YPR027C	Q12079	277 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	YOL114C	Q12322	202 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	COX19	Q3E731	98 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	YLR149C	Q99296	730 aa		3.13	□□□□□ -1.91
NSP1	YJL041W	YPT1	P01123	206 aa	Known RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	RPS25B	P0C0T4	108 aa	Known RBP	3.13	□□□□□ -1.91
NSP1	YJL041W	LRE1	P25579	583 aa	Known RBP	3.13	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 39.5 ms