RNA–Protein interactions for RNA: YHR076W

PTC7, Transcript of Type 2C serine/threonine protein phosphatase (PP2C), yeast

Gene PTC7, Length 1,032 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PTC7	YHR076W	SGA1	P08019	549 aa		5.89	□□□□□ -1.47
PTC7	YHR076W	RPL35A	P0CX84	120 aa	Known RBP	5.89	□□□□□ -1.47
PTC7	YHR076W	RPL35B	P0CX85	120 aa	Known RBP	5.89	□□□□□ -1.47
PTC7	YHR076W	RPL3	P14126	387 aa	Known RBP	5.89	□□□□□ -1.47
PTC7	YHR076W	DEG1	P31115	442 aa	Known RBP	5.89	□□□□□ -1.47
PTC7	YHR076W	ACH1	P32316	526 aa		5.89	□□□□□ -1.47
PTC7	YHR076W	SDH8	P38345	138 aa		5.89	□□□□□ -1.47
PTC7	YHR076W	OTU1	P43558	301 aa		5.89	□□□□□ -1.47
PTC7	YHR076W	GNA1	P43577	159 aa	Predicted RBP	5.89	□□□□□ -1.47
PTC7	YHR076W	CIN2	P46670	268 aa		5.89	□□□□□ -1.47
PTC7	YHR076W	FMP48	P53233	369 aa		5.89	□□□□□ -1.47
PTC7	YHR076W	RSM27	P53305	110 aa		5.89	□□□□□ -1.47
PTC7	YHR076W	YLR283W	Q05867	314 aa		5.89	□□□□□ -1.47
PTC7	YHR076W	YLR352W	Q06479	807 aa		5.89	□□□□□ -1.47
PTC7	YHR076W	YNL162W-A	Q3E7A8	72 aa		5.89	□□□□□ -1.47
PTC7	YHR076W	IPP1	P00817	287 aa	Known RBP	5.88	□□□□□ -1.47
PTC7	YHR076W	IFM1	P25038	676 aa		5.88	□□□□□ -1.47
PTC7	YHR076W	YCP4	P25349	247 aa	Known RBP	5.88	□□□□□ -1.47
PTC7	YHR076W	YBL010C	P32788	280 aa		5.88	□□□□□ -1.47
PTC7	YHR076W	ARC40	P38328	384 aa	Known RBP	5.88	□□□□□ -1.47
PTC7	YHR076W	YER084W	P40057	128 aa		5.88	□□□□□ -1.47
PTC7	YHR076W	YIL060W	P40519	144 aa		5.88	□□□□□ -1.47
PTC7	YHR076W	MOB2	P43563	287 aa		5.88	□□□□□ -1.47
PTC7	YHR076W	SIP18	P50263	79 aa		5.88	□□□□□ -1.47
PTC7	YHR076W	NSA1	P53136	463 aa	Predicted RBP	5.88	□□□□□ -1.47
PTC7	YHR076W	BUD25	P85052	153 aa		5.88	□□□□□ -1.47
PTC7	YHR076W	YPL272C	Q08984	517 aa		5.88	□□□□□ -1.47
PTC7	YHR076W	PRM4	Q12498	284 aa		5.88	□□□□□ -1.47
PTC7	YHR076W	GAL1	P04385	528 aa		5.87	□□□□□ -1.47
PTC7	YHR076W	STF2	P16965	84 aa		5.87	□□□□□ -1.47
PTC7	YHR076W	VMA5	P31412	392 aa	Known RBP	5.87	□□□□□ -1.47
PTC7	YHR076W	ARO4	P32449	370 aa	Known RBP	5.87	□□□□□ -1.47
PTC7	YHR076W	MRPS5	P33759	307 aa		5.87	□□□□□ -1.47
PTC7	YHR076W	MCH2	P36032	473 aa		5.87	□□□□□ -1.47
PTC7	YHR076W	UTP30	P36144	274 aa	Known RBP	5.87	□□□□□ -1.47
PTC7	YHR076W	MRPL27	P36526	146 aa	Predicted RBP	5.87	□□□□□ -1.47
PTC7	YHR076W	MRPL36	P36531	177 aa		5.87	□□□□□ -1.47
PTC7	YHR076W	MTC6	P38849	526 aa		5.87	□□□□□ -1.47
PTC7	YHR076W	SWM2	P40342	146 aa		5.87	□□□□□ -1.47
PTC7	YHR076W	YIL029C	P40538	142 aa		5.87	□□□□□ -1.47
PTC7	YHR076W	MRPL50	P53724	139 aa		5.87	□□□□□ -1.47
PTC7	YHR076W	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	5.87	□□□□□ -1.47	not detected
PTC7	YHR076W	PET20	Q99373	253 aa		5.87	□□□□□ -1.47
PTC7	YHR076W	CDC28	P00546	298 aa	Known RBP	5.86	□□□□□ -1.47
PTC7	YHR076W	ARO3	P14843	370 aa	Known RBP	5.86	□□□□□ -1.47
PTC7	YHR076W	PCL1	P24867	279 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	CPR4	P25334	318 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	YCR101C	P25607	182 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	MRP17	P28778	131 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	REC114	P32841	428 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	YKL063C	P35725	167 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	ARO9	P38840	513 aa	Predicted RBP	5.86	□□□□□ -1.47
PTC7	YHR076W	GPI16	P38875	610 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	SEN34	P39707	275 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	YND1	P40009	630 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	PHB2	P50085	310 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	ACS1	Q01574	713 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	VBA1	Q04301	562 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	YPR098C	Q06089	161 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	ORM2	Q06144	216 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	FIT3	Q08907	204 aa		5.86	□□□□□ -1.47
PTC7	YHR076W	FOL3	Q12676	427 aa	Predicted RBP	5.86	□□□□□ -1.47
PTC7	YHR076W	TOR1	P35169	2470 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	SEC16	P48415	2195 aa	Known RBP	5.85	□□□□□ -1.47
PTC7	YHR076W	ARG80	P07249	177 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	GRX2	P17695	143 aa	Known RBP	5.85	□□□□□ -1.47
PTC7	YHR076W	HNM1	P19807	563 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	ATG15	P25641	520 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	PEX4	P29340	183 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	ERG3	P32353	365 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	FMT1	P32785	401 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	CLB6	P32943	380 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	RRF1	P38771	230 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	SSN8	P47821	323 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	YIP5	P53108	310 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	YML018C	Q03730	393 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	RRS1	Q08746	203 aa	Known RBP	5.85	□□□□□ -1.47
PTC7	YHR076W	ERP4	Q12450	207 aa		5.85	□□□□□ -1.47
PTC7	YHR076W	SAG1	P20840	650 aa		5.84	□□□□□ -1.47
PTC7	YHR076W	PAN3	P36102	679 aa	Predicted RBP	5.84	□□□□□ -1.47
PTC7	YHR076W	NAT2	P37293	288 aa		5.84	□□□□□ -1.47
PTC7	YHR076W	LAG1	P38703	411 aa		5.84	□□□□□ -1.47
PTC7	YHR076W	ALG9	P53868	555 aa	Known RBP	5.84	□□□□□ -1.47
PTC7	YHR076W	YDC1	Q02896	317 aa		5.84	□□□□□ -1.47
PTC7	YHR076W	YDR248C	Q03786	193 aa		5.84	□□□□□ -1.47
PTC7	YHR076W	PIN3	Q06449	215 aa		5.84	□□□□□ -1.47
PTC7	YHR076W	YOR186W	Q08560	144 aa		5.84	□□□□□ -1.47
PTC7	YHR076W	HUT1	Q12520	339 aa		5.84	□□□□□ -1.47
PTC7	YHR076W	YER175W-A	Q8TGU4	54 aa		5.84	□□□□□ -1.47
PTC7	YHR076W	RPL25	P04456	142 aa	Known RBP	5.83	□□□□□ -1.48
PTC7	YHR076W	PUT1	P09368	476 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	MAK32	P23060	363 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	YCR016W	P25617	290 aa	Known RBP	5.83	□□□□□ -1.48
PTC7	YHR076W	TRR1	P29509	319 aa	Known RBP	5.83	□□□□□ -1.48
PTC7	YHR076W	SUA5	P32579	426 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	VAM7	P32912	316 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	YPT10	P38146	199 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	5.83	□□□□□ -1.48	RIP-Chip
PTC7	YHR076W	FLX1	P40464	311 aa		5.83	□□□□□ -1.48
PTC7	YHR076W	BMT5	P40493	336 aa		5.83	□□□□□ -1.48

Retrieved 100 of 5,963 RNA–protein pairs in 47 ms