RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W RPL27BP0C2H7 136 aaKnown RBP1.45□□□□□ -2.18
SMD1YGR074W GCN3P14741 305 aa1.45□□□□□ -2.18
SMD1YGR074W CCA1P21269 546 aa1.45□□□□□ -2.18
SMD1YGR074W UTR5P32630 166 aa1.45□□□□□ -2.18
SMD1YGR074W SKG1P36169 355 aa1.45□□□□□ -2.18
SMD1YGR074W YBR063CP38083 404 aa1.45□□□□□ -2.18
SMD1YGR074W YHL026CP38740 315 aa1.45□□□□□ -2.18
SMD1YGR074W DOG2P38773 246 aa1.45□□□□□ -2.18
SMD1YGR074W DOG1P38774 246 aa1.45□□□□□ -2.18
SMD1YGR074W TRM5P38793 499 aa1.45□□□□□ -2.18
SMD1YGR074W RPF1P38805 295 aaKnown RBP1.45□□□□□ -2.18
SMD1YGR074W YHR125WP38831 101 aa1.45□□□□□ -2.18
SMD1YGR074W IKI1P38874 309 aa1.45□□□□□ -2.18
SMD1YGR074W PEX17P40155 199 aa1.45□□□□□ -2.18
SMD1YGR074W TIF34P40217 347 aaKnown RBP1.45□□□□□ -2.18
SMD1YGR074W YIL001WP40560 513 aa1.45□□□□□ -2.18
SMD1YGR074W DSK2P48510 373 aa1.45□□□□□ -2.18
SMD1YGR074W CWC23P52868 283 aaPredicted RBP1.45□□□□□ -2.18
SMD1YGR074W ERV29P53337 310 aa1.45□□□□□ -2.18
SMD1YGR074W SSU72P53538 206 aaPredicted RBP1.45□□□□□ -2.18
SMD1YGR074W PRM15Q03262 622 aa1.45□□□□□ -2.18
SMD1YGR074W YDR248CQ03786 193 aa1.45□□□□□ -2.18
SMD1YGR074W SUE1Q06524 206 aa1.45□□□□□ -2.18
SMD1YGR074W RDS3Q06835 107 aaPredicted RBP1.45□□□□□ -2.18
SMD1YGR074W CLP1Q08685 445 aaPredicted RBP1.45□□□□□ -2.18
SMD1YGR074W MDM32Q12171 622 aa1.45□□□□□ -2.18
SMD1YGR074W SAC3P46674 1301 aa1.44□□□□□ -2.18
SMD1YGR074W Q0255P03881 472 aa1.44□□□□□ -2.18
SMD1YGR074W RPL9AP05738 191 aaKnown RBP1.44□□□□□ -2.18
SMD1YGR074W DPM1P14020 267 aaKnown RBP1.44□□□□□ -2.18
SMD1YGR074W DBF2P22204 572 aa1.44□□□□□ -2.18
SMD1YGR074W SCM4P32564 187 aa1.44□□□□□ -2.18
SMD1YGR074W RMD6P39975 231 aa1.44□□□□□ -2.18
SMD1YGR074W COG3P40094 801 aa1.44□□□□□ -2.18
SMD1YGR074W YJR056CP47115 236 aa1.44□□□□□ -2.18
SMD1YGR074W RPL9BP51401 191 aaKnown RBP1.44□□□□□ -2.18
SMD1YGR074W MGA1P53050 456 aa1.44□□□□□ -2.18
SMD1YGR074W PDR17P53844 350 aa1.44□□□□□ -2.18
SMD1YGR074W DIA1P54005 336 aa1.44□□□□□ -2.18
SMD1YGR074W GRX3Q03835 250 aa1.44□□□□□ -2.18
SMD1YGR074W MSA1Q08471 629 aa1.44□□□□□ -2.18
SMD1YGR074W YOR268CQ08734 132 aa1.44□□□□□ -2.18
SMD1YGR074W YDR157WA0A023PZE8 133 aa1.43□□□□□ -2.18
SMD1YGR074W RPL26AP05743 127 aaKnown RBP1.43□□□□□ -2.18
SMD1YGR074W YPR170W-BP0C5R9 85 aa1.43□□□□□ -2.18
SMD1YGR074W PRX1P34227 261 aaKnown RBP1.43□□□□□ -2.18
SMD1YGR074W APS1P35181 156 aa1.43□□□□□ -2.18
SMD1YGR074W SDH4P37298 181 aa1.43□□□□□ -2.18
SMD1YGR074W RSM25P40496 264 aa1.43□□□□□ -2.18
SMD1YGR074W FAR7P43592 221 aa1.43□□□□□ -2.18
SMD1YGR074W SNX4P47057 423 aa1.43□□□□□ -2.18
SMD1YGR074W GET1P53192 235 aa1.43□□□□□ -2.18
SMD1YGR074W RPL26BP53221 127 aaKnown RBP1.43□□□□□ -2.18
SMD1YGR074W SLM2P53955 656 aa1.43□□□□□ -2.18
SMD1YGR074W DID2P69771 204 aa1.43□□□□□ -2.18
SMD1YGR074W MIX17Q03667 156 aa1.43□□□□□ -2.18
SMD1YGR074W NIP7Q08962 181 aaKnown RBP1.43□□□□□ -2.18
SMD1YGR074W RPL25P04456 142 aaKnown RBP1.42□□□□□ -2.18
SMD1YGR074W MSW1P04803 379 aa1.42□□□□□ -2.18
SMD1YGR074W PUT1P09368 476 aa1.42□□□□□ -2.18
SMD1YGR074W YHR032W-AP0C5N6 59 aa1.42□□□□□ -2.18
SMD1YGR074W ATG22P25568 528 aa1.42□□□□□ -2.18
SMD1YGR074W CLB6P32943 380 aa1.42□□□□□ -2.18
SMD1YGR074W SRY1P36007 326 aa1.42□□□□□ -2.18
SMD1YGR074W AST2P39945 430 aaKnown RBP1.42□□□□□ -2.18
SMD1YGR074W MRPL49P40858 161 aaPredicted RBP1.42□□□□□ -2.18
SMD1YGR074W TOS8P53147 276 aa1.42□□□□□ -2.18
SMD1YGR074W RSM10Q03201 203 aa1.42□□□□□ -2.18
SMD1YGR074W LPP1Q04396 274 aa1.42□□□□□ -2.18
SMD1YGR074W ATG38Q05789 226 aaKnown RBP1.42□□□□□ -2.18
SMD1YGR074W HRT1Q08273 121 aa1.42□□□□□ -2.18
SMD1YGR074W ABP140Q08641 628 aaKnown RBP1.42□□□□□ -2.18
SMD1YGR074W AKR2Q12013 749 aa1.42□□□□□ -2.18
SMD1YGR074W CDC8P00572 216 aa1.41□□□□□ -2.18
SMD1YGR074W YPK2P18961 677 aa1.41□□□□□ -2.18
SMD1YGR074W RFA3P26755 122 aaKnown RBP1.41□□□□□ -2.18
SMD1YGR074W OAC1P32332 324 aa1.41□□□□□ -2.18
SMD1YGR074W TAF14P35189 244 aa1.41□□□□□ -2.18
SMD1YGR074W MRPL28P36527 147 aa1.41□□□□□ -2.18
SMD1YGR074W YCR087C-AP37263 153 aa1.41□□□□□ -2.18
SMD1YGR074W ECM33P38248 429 aaKnown RBP1.41□□□□□ -2.18
SMD1YGR074W BMT5P40493 336 aa1.41□□□□□ -2.18
SMD1YGR074W YRB2P40517 327 aa1.41□□□□□ -2.18
SMD1YGR074W MNN5P46982 586 aa1.41□□□□□ -2.18
SMD1YGR074W HOP2P53187 214 aa1.41□□□□□ -2.18
SMD1YGR074W SNZ1Q03148 297 aa1.41□□□□□ -2.18
SMD1YGR074W ATO3Q12359 275 aa1.41□□□□□ -2.18
SMD1YGR074W TDA8Q6B2U8 126 aa1.41□□□□□ -2.18
SMD1YGR074W RAD9P14737 1309 aa1.4□□□□□ -2.18
SMD1YGR074W TUS1Q06412 1307 aa1.4□□□□□ -2.18
SMD1YGR074W MRPS28P21771 286 aa1.4□□□□□ -2.19
SMD1YGR074W SPS18P32572 300 aa1.4□□□□□ -2.19
SMD1YGR074W PTM1P32857 523 aa1.4□□□□□ -2.19
SMD1YGR074W POP4P38336 279 aa1.4□□□□□ -2.19
SMD1YGR074W GRE3P38715 327 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
SMD1YGR074W RPA43P46669 326 aa1.4□□□□□ -2.19
SMD1YGR074W CIS3P47001 227 aa1.4□□□□□ -2.19
SMD1YGR074W MMS2P53152 137 aa1.4□□□□□ -2.19
SMD1YGR074W YGR219WP53307 113 aa1.4□□□□□ -2.19
SMD1YGR074W YPL229WQ99395 206 aa1.4□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms