RNA–Protein interactions for RNA: YGL213C

SKI8, Transcript of Ski complex component and WD-repeat protein, yeast

Gene SKI8, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI8	YGL213C	AGA2	P32781	87 aa		3.56	□□□□□ -1.84
SKI8	YGL213C	GRE3	P38715	327 aa	Known RBP RIP-Chip data	3.56	□□□□□ -1.84	not detected
SKI8	YGL213C	OST2	P46964	130 aa		3.56	□□□□□ -1.84
SKI8	YGL213C	SYF2	P53277	215 aa	Predicted RBP	3.56	□□□□□ -1.84
SKI8	YGL213C	ABF2	Q02486	183 aa		3.56	□□□□□ -1.84
SKI8	YGL213C	AGC1	Q12482	902 aa		3.56	□□□□□ -1.84
SKI8	YGL213C	YHR139C-A	O13536	103 aa		3.55	□□□□□ -1.84
SKI8	YGL213C	MET2	P08465	486 aa		3.55	□□□□□ -1.84
SKI8	YGL213C	APS1	P35181	156 aa		3.55	□□□□□ -1.84
SKI8	YGL213C	YPT52	P36018	234 aa	Known RBP	3.55	□□□□□ -1.84
SKI8	YGL213C	FIS1	P40515	155 aa		3.55	□□□□□ -1.84
SKI8	YGL213C	FAR7	P43592	221 aa		3.55	□□□□□ -1.84
SKI8	YGL213C	GRH1	Q04410	372 aa	Known RBP	3.55	□□□□□ -1.84
SKI8	YGL213C	NIP7	Q08962	181 aa	Known RBP	3.55	□□□□□ -1.84
SKI8	YGL213C	ADH3	P07246	375 aa	Known RBP	3.54	□□□□□ -1.84
SKI8	YGL213C	FCY2	P17064	533 aa		3.54	□□□□□ -1.84
SKI8	YGL213C	DOG2	P38773	246 aa		3.54	□□□□□ -1.84
SKI8	YGL213C	DOG1	P38774	246 aa		3.54	□□□□□ -1.84
SKI8	YGL213C	YAR068W	P39564	161 aa		3.54	□□□□□ -1.84
SKI8	YGL213C	YIL001W	P40560	513 aa		3.54	□□□□□ -1.84
SKI8	YGL213C	PRM8	P53174	237 aa		3.54	□□□□□ -1.84
SKI8	YGL213C	GPM2	Q12008	311 aa		3.54	□□□□□ -1.84
SKI8	YGL213C	ADE1	P27616	306 aa		3.53	□□□□□ -1.84
SKI8	YGL213C	RPF1	P38805	295 aa	Known RBP	3.53	□□□□□ -1.84
SKI8	YGL213C	YJL016W	P47072	561 aa		3.53	□□□□□ -1.84
SKI8	YGL213C	YJR141W	P47172	347 aa	Predicted RBP	3.53	□□□□□ -1.84
SKI8	YGL213C	MMS2	P53152	137 aa		3.53	□□□□□ -1.84
SKI8	YGL213C	RSM10	Q03201	203 aa		3.53	□□□□□ -1.84
SKI8	YGL213C	SAS5	Q99314	248 aa		3.53	□□□□□ -1.84
SKI8	YGL213C	ATP7	P30902	174 aa		3.52	□□□□□ -1.85
SKI8	YGL213C	YBR063C	P38083	404 aa		3.52	□□□□□ -1.85
SKI8	YGL213C	YER034W	P40022	185 aa	Known RBP	3.52	□□□□□ -1.85
SKI8	YGL213C	ARC15	P40518	154 aa	RIP-Chip data	3.52	□□□□□ -1.85	not detected
SKI8	YGL213C	PIR5	P46999	287 aa		3.52	□□□□□ -1.85
SKI8	YGL213C	YMR279C	Q03263	540 aa		3.52	□□□□□ -1.85
SKI8	YGL213C	ATG39	Q06159	398 aa		3.52	□□□□□ -1.85
SKI8	YGL213C	YOR268C	Q08734	132 aa		3.52	□□□□□ -1.85
SKI8	YGL213C	NOP1	P15646	327 aa	Known RBP	3.51	□□□□□ -1.85
SKI8	YGL213C	YKR032W	P36127	104 aa		3.51	□□□□□ -1.85
SKI8	YGL213C	YHR125W	P38831	101 aa		3.51	□□□□□ -1.85
SKI8	YGL213C	YER084W	P40057	128 aa		3.51	□□□□□ -1.85
SKI8	YGL213C	RPA43	P46669	326 aa		3.51	□□□□□ -1.85
SKI8	YGL213C	FEX1	Q08913	375 aa		3.51	□□□□□ -1.85
SKI8	YGL213C	FEX2	Q08991	375 aa		3.51	□□□□□ -1.85
SKI8	YGL213C	MDM32	Q12171	622 aa		3.51	□□□□□ -1.85
SKI8	YGL213C	FAB1	P34756	2278 aa		3.5	□□□□□ -1.85
SKI8	YGL213C	YPR170W-B	P0C5R9	85 aa		3.5	□□□□□ -1.85
SKI8	YGL213C	MRPL28	P36527	147 aa		3.5	□□□□□ -1.85
SKI8	YGL213C	SEC72	P39742	193 aa	Known RBP	3.5	□□□□□ -1.85
SKI8	YGL213C	YER188W	P40103	239 aa		3.5	□□□□□ -1.85
SKI8	YGL213C	YJR056C	P47115	236 aa		3.5	□□□□□ -1.85
SKI8	YGL213C	DID2	P69771	204 aa		3.5	□□□□□ -1.85
SKI8	YGL213C	PEX12	Q04370	399 aa		3.5	□□□□□ -1.85
SKI8	YGL213C	CLP1	Q08685	445 aa	Predicted RBP	3.5	□□□□□ -1.85
SKI8	YGL213C	PRM7	Q12459	698 aa		3.5	□□□□□ -1.85
SKI8	YGL213C	KRE1	P17260	313 aa		3.49	□□□□□ -1.85
SKI8	YGL213C	RSA4	P25382	515 aa	Known RBP	3.49	□□□□□ -1.85
SKI8	YGL213C	RMD6	P39975	231 aa		3.49	□□□□□ -1.85
SKI8	YGL213C	YGL088W	P53151	121 aa		3.49	□□□□□ -1.85
SKI8	YGL213C	Q0255	P03881	472 aa		3.48	□□□□□ -1.85
SKI8	YGL213C	ECM33	P38248	429 aa	Known RBP	3.48	□□□□□ -1.85
SKI8	YGL213C	DIA1	P54005	336 aa		3.48	□□□□□ -1.85
SKI8	YGL213C	LPP1	Q04396	274 aa		3.48	□□□□□ -1.85
SKI8	YGL213C	TDA8	Q6B2U8	126 aa		3.48	□□□□□ -1.85
SKI8	YGL213C	RPL25	P04456	142 aa	Known RBP	3.47	□□□□□ -1.85
SKI8	YGL213C	YHR032W-A	P0C5N6	59 aa		3.47	□□□□□ -1.85
SKI8	YGL213C	ATG22	P25568	528 aa		3.47	□□□□□ -1.85
SKI8	YGL213C	VMA11	P32842	164 aa		3.47	□□□□□ -1.85
SKI8	YGL213C	PTM1	P32857	523 aa		3.47	□□□□□ -1.85
SKI8	YGL213C	IRC22	P40006	225 aa		3.47	□□□□□ -1.85
SKI8	YGL213C	TIF34	P40217	347 aa	Known RBP	3.47	□□□□□ -1.85
SKI8	YGL213C	YGR026W	P53217	278 aa		3.47	□□□□□ -1.85
SKI8	YGL213C	SSU72	P53538	206 aa	Predicted RBP	3.47	□□□□□ -1.85
SKI8	YGL213C	PET191	Q02772	108 aa		3.47	□□□□□ -1.85
SKI8	YGL213C	YHR214C-E	Q8TGK0	99 aa		3.47	□□□□□ -1.85
SKI8	YGL213C	SEC4	P07560	215 aa	Known RBP	3.46	□□□□□ -1.86
SKI8	YGL213C	MIG1	P27705	504 aa		3.46	□□□□□ -1.86
SKI8	YGL213C	CAF4	P36130	643 aa		3.46	□□□□□ -1.86
SKI8	YGL213C	EGD2	P38879	174 aa	Known RBP	3.46	□□□□□ -1.86
SKI8	YGL213C	AIM25	P47140	327 aa		3.46	□□□□□ -1.86
SKI8	YGL213C	LSM7	P53905	115 aa	Known RBP	3.46	□□□□□ -1.86
SKI8	YGL213C	YNG1	Q08465	219 aa		3.46	□□□□□ -1.86
SKI8	YGL213C	DPM1	P14020	267 aa	Known RBP	3.45	□□□□□ -1.86
SKI8	YGL213C	TCA17	P32613	152 aa		3.45	□□□□□ -1.86
SKI8	YGL213C	AST2	P39945	430 aa	Known RBP	3.45	□□□□□ -1.86
SKI8	YGL213C	GAS3	Q03655	524 aa		3.45	□□□□□ -1.86
SKI8	YGL213C	FKS1	P38631	1876 aa	Known RBP	3.44	□□□□□ -1.86
SKI8	YGL213C	YPR096C	O13587	100 aa		3.44	□□□□□ -1.86
SKI8	YGL213C	SKG1	P36169	355 aa		3.44	□□□□□ -1.86
SKI8	YGL213C	COG3	P40094	801 aa		3.44	□□□□□ -1.86
SKI8	YGL213C	RSM25	P40496	264 aa		3.44	□□□□□ -1.86
SKI8	YGL213C	YNL010W	P53981	241 aa	Known RBP	3.44	□□□□□ -1.86
SKI8	YGL213C	CDC7	P06243	507 aa		3.43	□□□□□ -1.86
SKI8	YGL213C	KSS1	P14681	368 aa		3.43	□□□□□ -1.86
SKI8	YGL213C	CCA1	P21269	546 aa		3.43	□□□□□ -1.86
SKI8	YGL213C	POP4	P38336	279 aa		3.43	□□□□□ -1.86
SKI8	YGL213C	YET3	Q07451	203 aa		3.43	□□□□□ -1.86
SKI8	YGL213C	YOL160W	Q08321	113 aa		3.43	□□□□□ -1.86
SKI8	YGL213C	GRE1	Q08969	168 aa		3.43	□□□□□ -1.86
SKI8	YGL213C	RPL9A	P05738	191 aa	Known RBP	3.42	□□□□□ -1.86

Retrieved 100 of 5,963 RNA–protein pairs in 75.7 ms