RNA–Protein interactions for RNA: YFL028C

CAF16, Transcript of Part of evolutionarily-conserved CCR4-NOT regulatory complex, yeast

Gene CAF16, Length 870 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	YFL028C	SPT4	P32914	102 aa	Predicted RBP	3.79	□□□□□ -1.8
CAF16	YFL028C	FZO1	P38297	855 aa		3.79	□□□□□ -1.8
CAF16	YFL028C	AIM2	P39721	246 aa		3.79	□□□□□ -1.8
CAF16	YFL028C	YNL033W	P53964	284 aa		3.79	□□□□□ -1.8
CAF16	YFL028C	YNL019C	P53975	284 aa		3.79	□□□□□ -1.8
CAF16	YFL028C	ADD37	Q03233	198 aa		3.79	□□□□□ -1.8
CAF16	YFL028C	VBA1	Q04301	562 aa		3.79	□□□□□ -1.8
CAF16	YFL028C	SSQ1	Q05931	657 aa	Predicted RBP	3.79	□□□□□ -1.8
CAF16	YFL028C	YLR036C	Q07986	203 aa		3.79	□□□□□ -1.8
CAF16	YFL028C	MED4	Q12343	284 aa		3.79	□□□□□ -1.8
CAF16	YFL028C	CAB3	P36076	571 aa		3.78	□□□□□ -1.8
CAF16	YFL028C	MTW1	P39731	289 aa		3.78	□□□□□ -1.8
CAF16	YFL028C	PAC10	P48363	199 aa		3.78	□□□□□ -1.8
CAF16	YFL028C	GET1	P53192	235 aa		3.78	□□□□□ -1.8
CAF16	YFL028C	YNR066C	P53752	436 aa		3.78	□□□□□ -1.8
CAF16	YFL028C	OST6	Q03723	332 aa		3.78	□□□□□ -1.8
CAF16	YFL028C	SCW10	Q04951	389 aa		3.78	□□□□□ -1.8
CAF16	YFL028C	PEX30	Q06169	523 aa		3.78	□□□□□ -1.8
CAF16	YFL028C	FOL3	Q12676	427 aa	Predicted RBP	3.78	□□□□□ -1.8
CAF16	YFL028C	PRP8	P33334	2413 aa	Known RBP	3.78	□□□□□ -1.81
CAF16	YFL028C	CUP1-1	P0CX80	61 aa		3.77	□□□□□ -1.81
CAF16	YFL028C	CUP1-2	P0CX81	61 aa		3.77	□□□□□ -1.81
CAF16	YFL028C	STP22	P25604	385 aa		3.77	□□□□□ -1.81
CAF16	YFL028C	TFC1	P32367	649 aa		3.77	□□□□□ -1.81
CAF16	YFL028C	ICE2	P40499	491 aa		3.77	□□□□□ -1.81
CAF16	YFL028C	SDS23	P53172	527 aa		3.77	□□□□□ -1.81
CAF16	YFL028C	IGO1	P53897	168 aa		3.77	□□□□□ -1.81
CAF16	YFL028C	TPS1	Q00764	495 aa	Known RBP	3.77	□□□□□ -1.81
CAF16	YFL028C	MRPS16	Q02608	121 aa		3.77	□□□□□ -1.81
CAF16	YFL028C	SPC2	Q04969	178 aa		3.77	□□□□□ -1.81
CAF16	YFL028C	YPR174C	Q06616	221 aa	Predicted RBP	3.77	□□□□□ -1.81
CAF16	YFL028C	MRP1	P10662	321 aa	Known RBP	3.76	□□□□□ -1.81
CAF16	YFL028C	MER1	P16523	270 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	PCL1	P24867	279 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	IFM1	P25038	676 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	LHP1	P33399	275 aa	Known RBP	3.76	□□□□□ -1.81
CAF16	YFL028C	SKG1	P36169	355 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	FES1	P38260	290 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	PRE5	P40302	234 aa	Known RBP	3.76	□□□□□ -1.81
CAF16	YFL028C	YAR1	P46683	200 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	ALB1	P47019	175 aa	Predicted RBP	3.76	□□□□□ -1.81
CAF16	YFL028C	TAD2	P47058	250 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	PGU1	P47180	361 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	RSM10	Q03201	203 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	API2	Q04413	109 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	ADH6	Q04894	360 aa	Known RBP	3.76	□□□□□ -1.81
CAF16	YFL028C	DPP1	Q05521	289 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	ARV1	Q06541	321 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	MHR1	Q06630	226 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	GPI11	Q06636	219 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	YPL278C	Q08990	100 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	ADF1	Q2V2Q1	113 aa		3.76	□□□□□ -1.81
CAF16	YFL028C	ZWF1	P11412	505 aa	Known RBP	3.75	□□□□□ -1.81
CAF16	YFL028C	POF1	P25576	258 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	LDB16	P25587	256 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	PEX3	P28795	441 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	MRPL6	P32904	214 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	YKL187C	P34231	750 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	GPX1	P36014	167 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	VPS51	P36116	164 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	RIB1	P38066	345 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	PDX3	P38075	228 aa	Known RBP	3.75	□□□□□ -1.81
CAF16	YFL028C	SDS24	P38314	527 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	BIG1	P38813	335 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	TRR2	P38816	342 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	YGL262W	P53054	175 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	YPS5	P53057	165 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	FMP48	P53233	369 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	YGR067C	P53243	804 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	YOR292C	Q08743	309 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	VIK1	Q12045	647 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	YOR029W	Q12243	111 aa		3.75	□□□□□ -1.81
CAF16	YFL028C	YSF3	P0C074	85 aa	Predicted RBP	3.74	□□□□□ -1.81
CAF16	YFL028C	RPS1B	P23248	255 aa	Known RBP	3.74	□□□□□ -1.81
CAF16	YFL028C	MRPL27	P36526	146 aa	Predicted RBP	3.74	□□□□□ -1.81
CAF16	YFL028C	SMP1	P38128	452 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	MPM1	P40364	252 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	CUP9	P41817	306 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	YJR141W	P47172	347 aa	Predicted RBP	3.74	□□□□□ -1.81
CAF16	YFL028C	RPS12	P48589	143 aa	Known RBP	3.74	□□□□□ -1.81
CAF16	YFL028C	MPA43	P53583	542 aa	Predicted RBP	3.74	□□□□□ -1.81
CAF16	YFL028C	YNL095C	P53932	642 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	HAL1	Q01766	294 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	INP1	Q03694	420 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	PEX12	Q04370	399 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	ATG38	Q05789	226 aa	Known RBP	3.74	□□□□□ -1.81
CAF16	YFL028C	YPR172W	Q06608	200 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	YOL029C	Q08187	201 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	AKR2	Q12013	749 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	TPO4	Q12256	659 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	MHF2	Q3E829	80 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	NUM1	Q00402	2748 aa		3.74	□□□□□ -1.81
CAF16	YFL028C	MEC1	P38111	2368 aa		3.73	□□□□□ -1.81
CAF16	YFL028C	YBR056W-A	I2HB52	66 aa		3.73	□□□□□ -1.81
CAF16	YFL028C	TIM9	O74700	87 aa		3.73	□□□□□ -1.81
CAF16	YFL028C	ARO4	P32449	370 aa	Known RBP	3.73	□□□□□ -1.81
CAF16	YFL028C	APS3	P47064	194 aa		3.73	□□□□□ -1.81
CAF16	YFL028C	RMR1	P53060	241 aa		3.73	□□□□□ -1.81
CAF16	YFL028C	TPN1	P53099	579 aa		3.73	□□□□□ -1.81
CAF16	YFL028C	YMR244W	Q04018	355 aa		3.73	□□□□□ -1.81

Retrieved 100 of 5,963 RNA–protein pairs in 110.7 ms