RNA–Protein interactions for RNA: YER118C

SHO1, Transcript of Transmembrane osmosensor for filamentous growth and HOG pathways, yeastyeast

Gene SHO1, Length 1,104 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHO1YER118C RPB5P20434 215 aa5.39□□□□□ -1.55
SHO1YER118C AAT2P23542 418 aaKnown RBP5.39□□□□□ -1.55
SHO1YER118C IMP1P28627 190 aa5.39□□□□□ -1.55
SHO1YER118C ERG24P32462 438 aaKnown RBP5.39□□□□□ -1.55
SHO1YER118C DOG2P38773 246 aa5.39□□□□□ -1.55
SHO1YER118C DOG1P38774 246 aa5.39□□□□□ -1.55
SHO1YER118C RRG9P40156 214 aa5.39□□□□□ -1.55
SHO1YER118C YNL208WP40159 199 aaKnown RBP5.39□□□□□ -1.55
SHO1YER118C XBP1P40489 647 aa5.39□□□□□ -1.55
SHO1YER118C YFL064CP43540 174 aa5.39□□□□□ -1.55
SHO1YER118C COQ5P49017 307 aa5.39□□□□□ -1.55
SHO1YER118C ERV29P53337 310 aa5.39□□□□□ -1.55
SHO1YER118C TMA20P89886 181 aaPredicted RBP5.39□□□□□ -1.55
SHO1YER118C MRX11Q03079 207 aa5.39□□□□□ -1.55
SHO1YER118C YDR476CQ03362 224 aa5.39□□□□□ -1.55
SHO1YER118C YLR046CQ12253 270 aa5.39□□□□□ -1.55
SHO1YER118C RPO41P13433 1351 aaKnown RBP5.39□□□□□ -1.55
SHO1YER118C CDC8P00572 216 aa5.38□□□□□ -1.55
SHO1YER118C RPL25P04456 142 aaKnown RBP5.38□□□□□ -1.55
SHO1YER118C TRM7P38238 310 aaKnown RBP5.38□□□□□ -1.55
SHO1YER118C YER137CP40083 148 aaKnown RBP5.38□□□□□ -1.55
SHO1YER118C RBL2P48606 106 aaKnown RBP5.38□□□□□ -1.55
SHO1YER118C YGR015CP53208 328 aa5.38□□□□□ -1.55
SHO1YER118C SUE1Q06524 206 aa5.38□□□□□ -1.55
SHO1YER118C YPK9Q12697 1472 aa5.38□□□□□ -1.55
SHO1YER118C MYO2P19524 1574 aaKnown RBP5.38□□□□□ -1.55
SHO1YER118C SIR2P06700 562 aa5.37□□□□□ -1.55
SHO1YER118C PTM1P32857 523 aa5.37□□□□□ -1.55
SHO1YER118C CPR5P35176 225 aa5.37□□□□□ -1.55
SHO1YER118C SHE1P38200 338 aa5.37□□□□□ -1.55
SHO1YER118C RMD6P39975 231 aa5.37□□□□□ -1.55
SHO1YER118C YFL067WP43537 175 aa5.37□□□□□ -1.55
SHO1YER118C ILM1P47155 203 aa5.37□□□□□ -1.55
SHO1YER118C BNS1P50084 137 aa5.37□□□□□ -1.55
SHO1YER118C WSC2P53832 503 aa5.37□□□□□ -1.55
SHO1YER118C SHH4Q06236 168 aa5.37□□□□□ -1.55
SHO1YER118C WIP1Q2V2P8 89 aa5.37□□□□□ -1.55
SHO1YER118C YHR214C-EQ8TGK0 99 aa5.37□□□□□ -1.55
SHO1YER118C ATG22P25568 528 aa5.36□□□□□ -1.55
SHO1YER118C YIL012WP40551 113 aa5.36□□□□□ -1.55
SHO1YER118C PHB1P40961 287 aa5.36□□□□□ -1.55
SHO1YER118C YML108WQ03759 105 aa5.36□□□□□ -1.55
SHO1YER118C RAV2Q03956 351 aa5.36□□□□□ -1.55
SHO1YER118C YBL008W-AQ3E821 79 aa5.36□□□□□ -1.55
SHO1YER118C NAG1Q8TGN9 163 aa5.36□□□□□ -1.55
SHO1YER118C POL1P13382 1468 aa5.35□□□□□ -1.55
SHO1YER118C MDS3P53094 1487 aa5.35□□□□□ -1.55
SHO1YER118C SKI3P17883 1432 aaKnown RBP5.35□□□□□ -1.55
SHO1YER118C MRPS28P21771 286 aa5.35□□□□□ -1.55
SHO1YER118C PRS3P38689 320 aaKnown RBP5.35□□□□□ -1.55
SHO1YER118C YHL044WP38727 235 aa5.35□□□□□ -1.55
SHO1YER118C EFM1P38732 585 aa5.35□□□□□ -1.55
SHO1YER118C TRR2P38816 342 aa5.35□□□□□ -1.55
SHO1YER118C EDC2P40023 145 aaPredicted RBP5.35□□□□□ -1.55
SHO1YER118C HMF1P40037 129 aaKnown RBP5.35□□□□□ -1.55
SHO1YER118C CAT5P41735 233 aa5.35□□□□□ -1.55
SHO1YER118C ATG18P43601 500 aa5.35□□□□□ -1.55
SHO1YER118C APS3P47064 194 aa5.35□□□□□ -1.55
SHO1YER118C CRH1P53301 507 aa5.35□□□□□ -1.55
SHO1YER118C VHS1Q03785 461 aa5.35□□□□□ -1.55
SHO1YER118C GPI17Q04080 534 aa5.35□□□□□ -1.55
SHO1YER118C YPR202WQ08993 238 aa5.35□□□□□ -1.55
SHO1YER118C Q0144Q9ZZW2 109 aa5.35□□□□□ -1.55
SHO1YER118C GLT1Q12680 2145 aaKnown RBP5.35□□□□□ -1.55
SHO1YER118C BGL2P15703 313 aaKnown RBP5.34□□□□□ -1.55
SHO1YER118C CPR4P25334 318 aa5.34□□□□□ -1.55
SHO1YER118C ILV6P25605 309 aaKnown RBP5.34□□□□□ -1.55
SHO1YER118C SUA7P29055 345 aaPredicted RBP5.34□□□□□ -1.55
SHO1YER118C UBP5P39944 805 aa5.34□□□□□ -1.55
SHO1YER118C YGR050CP53231 118 aa5.34□□□□□ -1.55
SHO1YER118C IPP1P00817 287 aaKnown RBP5.33□□□□□ -1.56
SHO1YER118C CDC7P06243 507 aa5.33□□□□□ -1.56
SHO1YER118C PBI2P0CT04 75 aaKnown RBP5.33□□□□□ -1.56
SHO1YER118C YKL102CP34249 101 aa5.33□□□□□ -1.56
SHO1YER118C SFK1P35735 353 aa5.33□□□□□ -1.56
SHO1YER118C TVP38P36164 337 aa5.33□□□□□ -1.56
SHO1YER118C PHO89P38361 574 aa5.33□□□□□ -1.56
SHO1YER118C YER186CP40101 306 aa5.33□□□□□ -1.56
SHO1YER118C CCC1P47818 322 aa5.33□□□□□ -1.56
SHO1YER118C COS10P52924 374 aa5.33□□□□□ -1.56
SHO1YER118C UBC7Q02159 165 aa5.33□□□□□ -1.56
SHO1YER118C YDR249CQ03787 373 aa5.33□□□□□ -1.56
SHO1YER118C YOR376WQ08900 122 aa5.33□□□□□ -1.56
SHO1YER118C PST2Q12335 198 aaKnown RBP5.33□□□□□ -1.56
SHO1YER118C JID1Q12350 301 aa5.33□□□□□ -1.56
SHO1YER118C YAL063C-AQ3E791 96 aa5.33□□□□□ -1.56
SHO1YER118C RIB3Q99258 208 aa5.33□□□□□ -1.56
SHO1YER118C MAG1P22134 296 aaKnown RBP5.32□□□□□ -1.56
SHO1YER118C ERG2P32352 222 aa5.32□□□□□ -1.56
SHO1YER118C CSE2P33308 149 aa5.32□□□□□ -1.56
SHO1YER118C CSG2P35206 410 aa5.32□□□□□ -1.56
SHO1YER118C YHI9P38765 294 aa5.32□□□□□ -1.56
SHO1YER118C YIL152WP40455 235 aa5.32□□□□□ -1.56
SHO1YER118C STB1P42845 420 aa5.32□□□□□ -1.56
SHO1YER118C BIR1P47134 954 aa5.32□□□□□ -1.56
SHO1YER118C RNH201P53942 307 aa5.32□□□□□ -1.56
SHO1YER118C YNL010WP53981 241 aaKnown RBP5.32□□□□□ -1.56
SHO1YER118C DID2P69771 204 aa5.32□□□□□ -1.56
SHO1YER118C RMI1Q02685 241 aa5.32□□□□□ -1.56
SHO1YER118C ELP3Q02908 557 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms