RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C SPS18P32572 300 aa0.96□□□□□ -2.26
SWI4YER111C AST1P35183 429 aa0.96□□□□□ -2.26
SWI4YER111C DRE2P36152 348 aa0.96□□□□□ -2.26
SWI4YER111C RTC3P38804 111 aaPredicted RBP0.96□□□□□ -2.26
SWI4YER111C SPL2P38839 148 aa0.96□□□□□ -2.26
SWI4YER111C MIC26P50087 233 aa0.96□□□□□ -2.26
SWI4YER111C OSH6Q02201 448 aa0.96□□□□□ -2.26
SWI4YER111C LOA1Q06508 300 aa0.96□□□□□ -2.26
SWI4YER111C YDL144CQ07589 356 aa0.96□□□□□ -2.26
SWI4YER111C BBP1Q12365 385 aa0.96□□□□□ -2.26
SWI4YER111C YPK2P18961 677 aa0.96□□□□□ -2.26
SWI4YER111C CKA2P19454 339 aa0.96□□□□□ -2.26
SWI4YER111C RPO26P20435 155 aa0.96□□□□□ -2.26
SWI4YER111C APA2P22108 325 aa0.96□□□□□ -2.26
SWI4YER111C YHI9P38765 294 aa0.96□□□□□ -2.26
SWI4YER111C YHB1P39676 399 aaKnown RBP0.96□□□□□ -2.26
SWI4YER111C YIR035CP40579 254 aa0.96□□□□□ -2.26
SWI4YER111C GET1P53192 235 aa0.96□□□□□ -2.26
SWI4YER111C TVP15Q03860 143 aa0.96□□□□□ -2.26
SWI4YER111C DCN1Q12395 269 aa0.96□□□□□ -2.26
SWI4YER111C CDC28P00546 298 aaKnown RBP0.95□□□□□ -2.26
SWI4YER111C PRE7P23724 241 aaKnown RBP0.95□□□□□ -2.26
SWI4YER111C URA8P38627 578 aaPredicted RBP0.95□□□□□ -2.26
SWI4YER111C SEO1P39709 593 aa0.95□□□□□ -2.26
SWI4YER111C YER034WP40022 185 aaKnown RBP0.95□□□□□ -2.26
SWI4YER111C YMD8Q03697 442 aa0.95□□□□□ -2.26
SWI4YER111C FAR8Q05040 523 aa0.95□□□□□ -2.26
SWI4YER111C GPM2Q12008 311 aa0.95□□□□□ -2.26
SWI4YER111C ATG5Q12380 294 aa0.95□□□□□ -2.26
SWI4YER111C ISD11Q6Q560 94 aa0.95□□□□□ -2.26
SWI4YER111C NCB2Q92317 146 aa0.95□□□□□ -2.26
SWI4YER111C TPI1P00942 248 aaKnown RBP0.95□□□□□ -2.26
SWI4YER111C BCY1P07278 416 aaKnown RBP0.95□□□□□ -2.26
SWI4YER111C EHD3P28817 500 aa0.95□□□□□ -2.26
SWI4YER111C ASF2P32448 525 aaPredicted RBP0.95□□□□□ -2.26
SWI4YER111C NTF2P33331 125 aaKnown RBP0.95□□□□□ -2.26
SWI4YER111C CSG2P35206 410 aa0.95□□□□□ -2.26
SWI4YER111C TRM7P38238 310 aaKnown RBP0.95□□□□□ -2.26
SWI4YER111C YGP1P38616 354 aaKnown RBP0.95□□□□□ -2.26
SWI4YER111C SUR2P38992 349 aa0.95□□□□□ -2.26
SWI4YER111C YIL059CP40520 121 aa0.95□□□□□ -2.26
SWI4YER111C YJL016WP47072 561 aa0.95□□□□□ -2.26
SWI4YER111C ILM1P47155 203 aa0.95□□□□□ -2.26
SWI4YER111C BXI1P48558 297 aa0.95□□□□□ -2.26
SWI4YER111C EMI1Q04406 187 aa0.95□□□□□ -2.26
SWI4YER111C SEI1Q06058 285 aa0.95□□□□□ -2.26
SWI4YER111C YOR186WQ08560 144 aa0.95□□□□□ -2.26
SWI4YER111C CUP2P15315 225 aa0.95□□□□□ -2.26
SWI4YER111C FCY2P17064 533 aa0.95□□□□□ -2.26
SWI4YER111C DPB2P24482 689 aaPredicted RBP0.95□□□□□ -2.26
SWI4YER111C OAC1P32332 324 aa0.95□□□□□ -2.26
SWI4YER111C SFC1P33303 322 aa0.95□□□□□ -2.26
SWI4YER111C TKL2P33315 681 aa0.95□□□□□ -2.26
SWI4YER111C YOX1P34161 385 aa0.95□□□□□ -2.26
SWI4YER111C MID2P36027 376 aa0.95□□□□□ -2.26
SWI4YER111C CAB3P36076 571 aa0.95□□□□□ -2.26
SWI4YER111C SLX1P38324 304 aa0.95□□□□□ -2.26
SWI4YER111C GRE3P38715 327 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
SWI4YER111C IKI1P38874 309 aa0.95□□□□□ -2.26
SWI4YER111C CAT5P41735 233 aa0.95□□□□□ -2.26
SWI4YER111C MRH4P53166 561 aa0.95□□□□□ -2.26
SWI4YER111C YGR067CP53243 804 aa0.95□□□□□ -2.26
SWI4YER111C NOP19P53317 196 aaPredicted RBP0.95□□□□□ -2.26
SWI4YER111C SMD1Q02260 146 aaPredicted RBP0.95□□□□□ -2.26
SWI4YER111C YMR114CQ04471 368 aaKnown RBP0.95□□□□□ -2.26
SWI4YER111C DIB1Q06819 143 aaPredicted RBP0.95□□□□□ -2.26
SWI4YER111C YPL257WQ08974 193 aa0.95□□□□□ -2.26
SWI4YER111C VPH2P32341 215 aa0.94□□□□□ -2.26
SWI4YER111C RCN1P36054 211 aa0.94□□□□□ -2.26
SWI4YER111C MSA2P36157 363 aa0.94□□□□□ -2.26
SWI4YER111C CPR7P47103 393 aa0.94□□□□□ -2.26
SWI4YER111C MGA1P53050 456 aa0.94□□□□□ -2.26
SWI4YER111C ACT1P60010 375 aaKnown RBP0.94□□□□□ -2.26
SWI4YER111C YDR248CQ03786 193 aa0.94□□□□□ -2.26
SWI4YER111C YDR222WQ04925 415 aa0.94□□□□□ -2.26
SWI4YER111C SYC1Q08553 188 aaPredicted RBP0.94□□□□□ -2.26
SWI4YER111C TPO4Q12256 659 aa0.94□□□□□ -2.26
SWI4YER111C HTL1Q9URQ5 78 aa0.94□□□□□ -2.26
SWI4YER111C RAD10P06838 210 aa0.94□□□□□ -2.26
SWI4YER111C SNA3P14359 133 aa0.94□□□□□ -2.26
SWI4YER111C RFA3P26755 122 aaKnown RBP0.94□□□□□ -2.26
SWI4YER111C BMH1P29311 267 aaKnown RBP0.94□□□□□ -2.26
SWI4YER111C RME1P32338 300 aaKnown RBP0.94□□□□□ -2.26
SWI4YER111C ERG24P32462 438 aaKnown RBP0.94□□□□□ -2.26
SWI4YER111C YAP3P38749 330 aa0.94□□□□□ -2.26
SWI4YER111C TRR2P38816 342 aa0.94□□□□□ -2.26
SWI4YER111C TEM1P38987 245 aa0.94□□□□□ -2.26
SWI4YER111C YAR068WP39564 161 aa0.94□□□□□ -2.26
SWI4YER111C SEC72P39742 193 aaKnown RBP0.94□□□□□ -2.26
SWI4YER111C BMT5P40493 336 aa0.94□□□□□ -2.26
SWI4YER111C PFS2P42841 465 aaKnown RBP0.94□□□□□ -2.26
SWI4YER111C UFD1P53044 361 aa0.94□□□□□ -2.26
SWI4YER111C YGL034CP53186 121 aa0.94□□□□□ -2.26
SWI4YER111C YNL046WP53956 172 aa0.94□□□□□ -2.26
SWI4YER111C YDR114CQ04597 100 aa0.94□□□□□ -2.26
SWI4YER111C MSA1Q08471 629 aa0.94□□□□□ -2.26
SWI4YER111C MDM32Q12171 622 aa0.94□□□□□ -2.26
SWI4YER111C PRR2Q12310 699 aa0.94□□□□□ -2.26
SWI4YER111C MRX4Q12467 430 aa0.94□□□□□ -2.26
SWI4YER111C YOL085CQ99345 113 aa0.94□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms