RNA–Protein interactions for RNA: YDR182W

CDC1, Transcript of Putative lipid phosphatase of the endoplasmic reticulum, yeast

Gene CDC1, Length 1,476 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC1	YDR182W	RPL5	P26321	297 aa	Known RBP	5.23	□□□□□ -1.57
CDC1	YDR182W	PDS1	P40316	373 aa	Predicted RBP	5.23	□□□□□ -1.57
CDC1	YDR182W	DOC1	P53068	250 aa		5.23	□□□□□ -1.57
CDC1	YDR182W	YGR054W	P53235	642 aa	Known RBP	5.23	□□□□□ -1.57
CDC1	YDR182W	RRP17	Q04031	235 aa	Predicted RBP	5.23	□□□□□ -1.57
CDC1	YDR182W	FCY1	Q12178	158 aa		5.23	□□□□□ -1.57
CDC1	YDR182W	ATG40	Q99325	256 aa		5.23	□□□□□ -1.57
CDC1	YDR182W	PET18	P25362	215 aa		5.22	□□□□□ -1.57
CDC1	YDR182W	ATG22	P25568	528 aa		5.22	□□□□□ -1.57
CDC1	YDR182W	PEX4	P29340	183 aa		5.22	□□□□□ -1.57
CDC1	YDR182W	VAM7	P32912	316 aa		5.22	□□□□□ -1.57
CDC1	YDR182W	DUT1	P33317	147 aa		5.22	□□□□□ -1.57
CDC1	YDR182W	SOR1	P35497	357 aa	Known RBP	5.22	□□□□□ -1.57
CDC1	YDR182W	FIG1	P38224	298 aa		5.22	□□□□□ -1.57
CDC1	YDR182W	CCZ1	P38273	704 aa		5.22	□□□□□ -1.57
CDC1	YDR182W	PRS2	P38620	318 aa	Known RBP	5.22	□□□□□ -1.57
CDC1	YDR182W	HSK3	P69852	69 aa		5.22	□□□□□ -1.57
CDC1	YDR182W	YDR415C	Q04033	374 aa	Predicted RBP	5.22	□□□□□ -1.57
CDC1	YDR182W	SOR2	Q07786	357 aa		5.22	□□□□□ -1.57
CDC1	YDR182W	YOR192C-C	Q3E736	78 aa		5.22	□□□□□ -1.57
CDC1	YDR182W	YLR358C	O13565	187 aa		5.21	□□□□□ -1.58
CDC1	YDR182W	GCN4	P03069	281 aa		5.21	□□□□□ -1.58
CDC1	YDR182W	RAD52	P06778	471 aa	Known RBP	5.21	□□□□□ -1.58
CDC1	YDR182W	PRE4	P30657	266 aa		5.21	□□□□□ -1.58
CDC1	YDR182W	PRY2	P36110	329 aa		5.21	□□□□□ -1.58
CDC1	YDR182W	TTI2	P47168	421 aa		5.21	□□□□□ -1.58
CDC1	YDR182W	ECM18	Q04623	453 aa		5.21	□□□□□ -1.58
CDC1	YDR182W	NEJ1	Q06148	342 aa		5.21	□□□□□ -1.58
CDC1	YDR182W	MED7	Q08278	222 aa		5.21	□□□□□ -1.58
CDC1	YDR182W	YPR071W	Q12346	211 aa		5.21	□□□□□ -1.58
CDC1	YDR182W	ATO3	Q12359	275 aa		5.21	□□□□□ -1.58
CDC1	YDR182W	BBP1	Q12365	385 aa		5.21	□□□□□ -1.58
CDC1	YDR182W	CDC31	P06704	161 aa	Known RBP	5.2	□□□□□ -1.58
CDC1	YDR182W	SUA7	P29055	345 aa	Predicted RBP	5.2	□□□□□ -1.58
CDC1	YDR182W	ERG3	P32353	365 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	ZUO1	P32527	433 aa	Known RBP	5.2	□□□□□ -1.58
CDC1	YDR182W	SWD2	P36104	329 aa	Predicted RBP	5.2	□□□□□ -1.58
CDC1	YDR182W	GNA1	P43577	159 aa	Predicted RBP	5.2	□□□□□ -1.58
CDC1	YDR182W	BNA1	P47096	177 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	YJR056C	P47115	236 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	EFM3	P47163	339 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	YNL234W	P53857	426 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	HOF1	Q05080	669 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	YOL118C	Q08259	102 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	CYC7	P00045	113 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	RPS18A	P0CX55	146 aa	Known RBP	5.2	□□□□□ -1.58
CDC1	YDR182W	RPS18B	P0CX56	146 aa	Predicted RBP	5.2	□□□□□ -1.58
CDC1	YDR182W	AGA2	P32781	87 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	5.2	□□□□□ -1.58	not detected
CDC1	YDR182W	SWD3	P38123	315 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	GPI14	P47088	403 aa	Known RBP	5.2	□□□□□ -1.58
CDC1	YDR182W	YAE1	P47118	141 aa	Predicted RBP	5.2	□□□□□ -1.58
CDC1	YDR182W	BXI1	P48558	297 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	HNT2	P49775	206 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	IMO32	P53219	342 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	YGR151C	P53287	111 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	CTF19	Q02732	369 aa		5.2	□□□□□ -1.58
CDC1	YDR182W	VMA6	P32366	345 aa	Known RBP	5.19	□□□□□ -1.58
CDC1	YDR182W	CBT1	P36038	271 aa	Predicted RBP	5.19	□□□□□ -1.58
CDC1	YDR182W	CCS1	P40202	249 aa	Known RBP	5.19	□□□□□ -1.58
CDC1	YDR182W	GWT1	P47026	490 aa		5.19	□□□□□ -1.58
CDC1	YDR182W	PUS4	P48567	403 aa	Known RBP	5.19	□□□□□ -1.58
CDC1	YDR182W	FIT1	Q04433	528 aa		5.19	□□□□□ -1.58
CDC1	YDR182W	HIS3	P06633	220 aa		5.18	□□□□□ -1.58
CDC1	YDR182W	PHO85	P17157	305 aa		5.18	□□□□□ -1.58
CDC1	YDR182W	YCR101C	P25607	182 aa		5.18	□□□□□ -1.58
CDC1	YDR182W	VMA5	P31412	392 aa	Known RBP	5.18	□□□□□ -1.58
CDC1	YDR182W	PMU1	P36069	295 aa		5.18	□□□□□ -1.58
CDC1	YDR182W	PAC2	P39937	518 aa		5.18	□□□□□ -1.58
CDC1	YDR182W	YJL218W	P40892	196 aa	Known RBP	5.18	□□□□□ -1.58
CDC1	YDR182W	FIP1	P45976	327 aa		5.18	□□□□□ -1.58
CDC1	YDR182W	SRL4	Q03085	281 aa		5.18	□□□□□ -1.58
CDC1	YDR182W	NGL2	Q03264	515 aa	Known RBP	5.18	□□□□□ -1.58
CDC1	YDR182W	MIX17	Q03667	156 aa		5.18	□□□□□ -1.58
CDC1	YDR182W	ODC2	Q99297	307 aa		5.18	□□□□□ -1.58
CDC1	YDR182W	ADE8	P04161	214 aa		5.17	□□□□□ -1.58
CDC1	YDR182W	TOM40	P23644	387 aa	Known RBP	5.17	□□□□□ -1.58
CDC1	YDR182W	RPL24B	P24000	155 aa	Known RBP	5.17	□□□□□ -1.58
CDC1	YDR182W	BUD23	P25627	275 aa	Predicted RBP	5.17	□□□□□ -1.58
CDC1	YDR182W	CPR5	P35176	225 aa		5.17	□□□□□ -1.58
CDC1	YDR182W	NTC20	P38302	140 aa	Predicted RBP	5.17	□□□□□ -1.58
CDC1	YDR182W	CUE1	P38428	203 aa		5.17	□□□□□ -1.58
CDC1	YDR182W	PCL6	P40038	420 aa		5.17	□□□□□ -1.58
CDC1	YDR182W	WWM1	P43582	211 aa	Known RBP	5.17	□□□□□ -1.58
CDC1	YDR182W	FMP48	P53233	369 aa		5.17	□□□□□ -1.58
CDC1	YDR182W	TFC7	Q12415	435 aa		5.17	□□□□□ -1.58
CDC1	YDR182W	QCR7	P00128	127 aa		5.16	□□□□□ -1.58
CDC1	YDR182W	ILV5	P06168	395 aa	Known RBP	5.16	□□□□□ -1.58
CDC1	YDR182W	BGL2	P15703	313 aa	Known RBP	5.16	□□□□□ -1.58
CDC1	YDR182W	RFA1	P22336	621 aa	Known RBP	5.16	□□□□□ -1.58
CDC1	YDR182W	RFA3	P26755	122 aa	Known RBP	5.16	□□□□□ -1.58
CDC1	YDR182W	OCH1	P31755	480 aa		5.16	□□□□□ -1.58
CDC1	YDR182W	YBR137W	P38276	179 aa		5.16	□□□□□ -1.58
CDC1	YDR182W	SSO2	P39926	295 aa		5.16	□□□□□ -1.58
CDC1	YDR182W	YIL060W	P40519	144 aa		5.16	□□□□□ -1.58
CDC1	YDR182W	GVP36	P40531	326 aa	Known RBP	5.16	□□□□□ -1.58
CDC1	YDR182W	YGR042W	P53227	271 aa		5.16	□□□□□ -1.58
CDC1	YDR182W	HNT1	Q04344	158 aa	Known RBP	5.16	□□□□□ -1.58
CDC1	YDR182W	NOC4	Q06512	552 aa	Predicted RBP	5.16	□□□□□ -1.58
CDC1	YDR182W	MDM36	Q06820	579 aa		5.16	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms