RNA–Protein interactions for RNA: YDL112W

TRM3, Transcript of 2'-O-ribose methyltransferase, yeastyeast

Gene TRM3, Length 4,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM3YDL112W YLR152CP54072 576 aa1.36□□□□□ -2.19
TRM3YDL112W VPS71Q03433 280 aa1.36□□□□□ -2.19
TRM3YDL112W GPI17Q04080 534 aa1.36□□□□□ -2.19
TRM3YDL112W ATG26Q06321 1198 aa1.36□□□□□ -2.19
TRM3YDL112W PCL9Q12477 304 aa1.36□□□□□ -2.19
TRM3YDL112W MRPL23Q12487 163 aaPredicted RBP1.36□□□□□ -2.19
TRM3YDL112W YMR105W-AQ8TGS8 64 aa1.36□□□□□ -2.19
TRM3YDL112W COX5BP00425 151 aa1.35□□□□□ -2.19
TRM3YDL112W YGL041W-AP0C5N3 154 aa1.35□□□□□ -2.19
TRM3YDL112W FAR1P21268 830 aa1.35□□□□□ -2.19
TRM3YDL112W ARC19P33204 171 aaKnown RBP1.35□□□□□ -2.19
TRM3YDL112W GDH2P33327 1092 aaKnown RBP1.35□□□□□ -2.19
TRM3YDL112W FRM2P37261 193 aa1.35□□□□□ -2.19
TRM3YDL112W RPS20P38701 121 aaKnown RBP1.35□□□□□ -2.19
TRM3YDL112W THO1P40040 218 aaKnown RBP1.35□□□□□ -2.19
TRM3YDL112W RRG9P40156 214 aa1.35□□□□□ -2.19
TRM3YDL112W SLM1P40485 686 aa1.35□□□□□ -2.19
TRM3YDL112W YDL186WP48568 277 aa1.35□□□□□ -2.19
TRM3YDL112W BRR6P53062 197 aa1.35□□□□□ -2.19
TRM3YDL112W YNL181WP53878 407 aa1.35□□□□□ -2.19
TRM3YDL112W NRK1P53915 240 aa1.35□□□□□ -2.19
TRM3YDL112W YKR005CQ02203 525 aa1.35□□□□□ -2.19
TRM3YDL112W MIX17Q03667 156 aa1.35□□□□□ -2.19
TRM3YDL112W REP2P03872 296 aa1.35□□□□□ -2.19
TRM3YDL112W RPL39P04650 51 aa1.35□□□□□ -2.19
TRM3YDL112W PHO85P17157 305 aa1.35□□□□□ -2.19
TRM3YDL112W ADH5P38113 351 aaKnown RBP1.35□□□□□ -2.19
TRM3YDL112W TRM5P38793 499 aa1.35□□□□□ -2.19
TRM3YDL112W NAS2P40555 220 aa1.35□□□□□ -2.19
TRM3YDL112W SFH5P47008 294 aa1.35□□□□□ -2.19
TRM3YDL112W DIE2P50076 525 aa1.35□□□□□ -2.19
TRM3YDL112W OKP1P53298 406 aa1.35□□□□□ -2.19
TRM3YDL112W YPL077CQ02831 240 aa1.35□□□□□ -2.19
TRM3YDL112W UTP15Q04305 513 aaKnown RBP1.35□□□□□ -2.19
TRM3YDL112W SPG4Q04438 115 aa1.35□□□□□ -2.19
TRM3YDL112W RBS1Q05672 457 aaKnown RBP1.35□□□□□ -2.19
TRM3YDL112W LIP2Q06005 328 aa1.35□□□□□ -2.19
TRM3YDL112W MED2Q12124 431 aa1.35□□□□□ -2.19
TRM3YDL112W COX2P00410 251 aa1.35□□□□□ -2.19
TRM3YDL112W MEK1P24719 497 aaPredicted RBP1.35□□□□□ -2.19
TRM3YDL112W YNL194CP40169 301 aa1.35□□□□□ -2.19
TRM3YDL112W YFL067WP43537 175 aa1.35□□□□□ -2.19
TRM3YDL112W WWM1P43582 211 aaKnown RBP1.35□□□□□ -2.19
TRM3YDL112W MRX5P47007 382 aa1.35□□□□□ -2.19
TRM3YDL112W SSN8P47821 323 aa1.35□□□□□ -2.19
TRM3YDL112W YGL159WP53110 370 aa1.35□□□□□ -2.19
TRM3YDL112W AAH1P53909 347 aa1.35□□□□□ -2.19
TRM3YDL112W RCF1Q03713 159 aa1.35□□□□□ -2.19
TRM3YDL112W YMR166CQ03829 368 aa1.35□□□□□ -2.19
TRM3YDL112W IRC25Q07951 179 aa1.35□□□□□ -2.19
TRM3YDL112W YDL009CQ12210 107 aa1.35□□□□□ -2.19
TRM3YDL112W YDL007C-AQ2V2Q0 85 aa1.35□□□□□ -2.19
TRM3YDL112W CDC28P00546 298 aaKnown RBP1.34□□□□□ -2.19
TRM3YDL112W TIF3P34167 436 aaKnown RBP1.34□□□□□ -2.19
TRM3YDL112W YBR144CP34215 104 aa1.34□□□□□ -2.19
TRM3YDL112W ZRT3P34240 503 aa1.34□□□□□ -2.19
TRM3YDL112W CTR2P38865 189 aa1.34□□□□□ -2.19
TRM3YDL112W EFM3P47163 339 aa1.34□□□□□ -2.19
TRM3YDL112W PGA1P53896 198 aa1.34□□□□□ -2.19
TRM3YDL112W RNH201P53942 307 aa1.34□□□□□ -2.19
TRM3YDL112W ASA1Q06822 443 aa1.34□□□□□ -2.19
TRM3YDL112W PST2Q12335 198 aaKnown RBP1.34□□□□□ -2.19
TRM3YDL112W MRP1P10662 321 aaKnown RBP1.34□□□□□ -2.19
TRM3YDL112W SPC34P36131 295 aa1.34□□□□□ -2.19
TRM3YDL112W PUS4P48567 403 aaKnown RBP1.34□□□□□ -2.19
TRM3YDL112W HOT1Q03213 719 aa1.34□□□□□ -2.19
TRM3YDL112W TDA1Q03533 586 aa1.34□□□□□ -2.19
TRM3YDL112W GEP3Q08622 556 aa1.34□□□□□ -2.19
TRM3YDL112W NFT1P0CE68 1218 aa1.34□□□□□ -2.2
TRM3YDL112W PHD1P36093 366 aa1.34□□□□□ -2.2
TRM3YDL112W YKR015CP36111 568 aa1.34□□□□□ -2.2
TRM3YDL112W PRS4P38063 326 aaPredicted RBP1.34□□□□□ -2.2
TRM3YDL112W ECM8P38246 354 aa1.34□□□□□ -2.2
TRM3YDL112W PEX32P38292 413 aa1.34□□□□□ -2.2
TRM3YDL112W SDS24P38314 527 aa1.34□□□□□ -2.2
TRM3YDL112W PRS2P38620 318 aaKnown RBP1.34□□□□□ -2.2
TRM3YDL112W PHO90P39535 881 aa1.34□□□□□ -2.2
TRM3YDL112W NOP16P40007 231 aaKnown RBP1.34□□□□□ -2.2
TRM3YDL112W RFC2P40348 353 aa1.34□□□□□ -2.2
TRM3YDL112W ERJ5P43613 295 aaPredicted RBP1.34□□□□□ -2.2
TRM3YDL112W RPA43P46669 326 aa1.34□□□□□ -2.2
TRM3YDL112W GWT1P47026 490 aa1.34□□□□□ -2.2
TRM3YDL112W AVT4P50944 713 aa1.34□□□□□ -2.2
TRM3YDL112W PAU12P53343 120 aa1.34□□□□□ -2.2
TRM3YDL112W NEJ1Q06148 342 aa1.34□□□□□ -2.2
TRM3YDL112W ORT1Q12375 292 aa1.34□□□□□ -2.2
TRM3YDL112W DGK1Q12382 290 aa1.34□□□□□ -2.2
TRM3YDL112W ADF1Q2V2Q1 113 aa1.34□□□□□ -2.2
TRM3YDL112W IFM1P25038 676 aa1.34□□□□□ -2.2
TRM3YDL112W VMA6P32366 345 aaKnown RBP1.34□□□□□ -2.2
TRM3YDL112W YMR099CQ03161 297 aaKnown RBP1.34□□□□□ -2.2
TRM3YDL112W FMP42Q04991 504 aa1.34□□□□□ -2.2
TRM3YDL112W MPD1Q12404 318 aaKnown RBP1.34□□□□□ -2.2
TRM3YDL112W RTN2Q12443 393 aa1.34□□□□□ -2.2
TRM3YDL112W SIR2P06700 562 aa1.33□□□□□ -2.2
TRM3YDL112W PRE7P23724 241 aaKnown RBP1.33□□□□□ -2.2
TRM3YDL112W YCR043CP25361 127 aa1.33□□□□□ -2.2
TRM3YDL112W ATG22P25568 528 aa1.33□□□□□ -2.2
TRM3YDL112W KRR1P25586 316 aaPredicted RBP1.33□□□□□ -2.2
TRM3YDL112W DPH5P32469 300 aaPredicted RBP1.33□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 25.8 ms