RNA–Protein interactions for RNA: YBR217W

ATG12, Transcript of Ubiquitin-like modifier involved in autophagy and the Cvt pathway, yeast

Gene ATG12, Length 561 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	YBR217W	YCR101C	P25607	182 aa		4.81	□□□□□ -1.64
ATG12	YBR217W	RFA3	P26755	122 aa	Known RBP	4.81	□□□□□ -1.64
ATG12	YBR217W	ERG3	P32353	365 aa		4.81	□□□□□ -1.64
ATG12	YBR217W	UTP11	P34247	250 aa	Predicted RBP	4.81	□□□□□ -1.64
ATG12	YBR217W	ALG14	P38242	237 aa		4.81	□□□□□ -1.64
ATG12	YBR217W	HPA3	P39979	161 aa		4.81	□□□□□ -1.64
ATG12	YBR217W	CCS1	P40202	249 aa	Known RBP	4.81	□□□□□ -1.64
ATG12	YBR217W	SER2	P42941	309 aa		4.81	□□□□□ -1.64
ATG12	YBR217W	YFL015C	P43578	164 aa		4.81	□□□□□ -1.64
ATG12	YBR217W	CWC23	P52868	283 aa	Predicted RBP	4.81	□□□□□ -1.64
ATG12	YBR217W	YGL262W	P53054	175 aa		4.81	□□□□□ -1.64
ATG12	YBR217W	OKP1	P53298	406 aa		4.81	□□□□□ -1.64
ATG12	YBR217W	HSK3	P69852	69 aa		4.81	□□□□□ -1.64
ATG12	YBR217W	RPL21A	Q02753	160 aa	Known RBP	4.81	□□□□□ -1.64
ATG12	YBR217W	KEI1	Q06346	221 aa		4.81	□□□□□ -1.64
ATG12	YBR217W	NGL1	Q08213	363 aa	Known RBP	4.81	□□□□□ -1.64
ATG12	YBR217W	VAM3	Q12241	283 aa		4.81	□□□□□ -1.64
ATG12	YBR217W	RPL21B	Q12672	160 aa	Known RBP	4.81	□□□□□ -1.64
ATG12	YBR217W	RPN13	O13563	156 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	RPL15A	P05748	204 aa	Known RBP	4.8	□□□□□ -1.64
ATG12	YBR217W	RPL3	P14126	387 aa	Known RBP	4.8	□□□□□ -1.64
ATG12	YBR217W	CDC34	P14682	295 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	PUP1	P25043	261 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	BUD23	P25627	275 aa	Predicted RBP	4.8	□□□□□ -1.64
ATG12	YBR217W	OCH1	P31755	480 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	ACH1	P32316	526 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	ZUO1	P32527	433 aa	Known RBP	4.8	□□□□□ -1.64
ATG12	YBR217W	MBA1	P38300	278 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	PIC2	P40035	300 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	YER188W	P40103	239 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	IRC18	P47056	224 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	HNT2	P49775	206 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	SKP1	P52286	194 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	YGL114W	P53134	725 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	YGR054W	P53235	642 aa	Known RBP	4.8	□□□□□ -1.64
ATG12	YBR217W	DUG3	P53871	357 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	RPL15B	P54780	204 aa	Predicted RBP	4.8	□□□□□ -1.64
ATG12	YBR217W	FIT1	Q04433	528 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	YLR031W	Q07978	186 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	YOL118C	Q08259	102 aa		4.8	□□□□□ -1.64
ATG12	YBR217W	AAC1	P04710	309 aa		4.79	□□□□□ -1.64
ATG12	YBR217W	GDH1	P07262	454 aa	Known RBP	4.79	□□□□□ -1.64
ATG12	YBR217W	ATG22	P25568	528 aa		4.79	□□□□□ -1.64
ATG12	YBR217W	ISC10	P32645	267 aa		4.79	□□□□□ -1.64
ATG12	YBR217W	ADH5	P38113	351 aa	Known RBP	4.79	□□□□□ -1.64
ATG12	YBR217W	NTC20	P38302	140 aa	Predicted RBP	4.79	□□□□□ -1.64
ATG12	YBR217W	YHR122W	P38829	231 aa		4.79	□□□□□ -1.64
ATG12	YBR217W	YJR011C	P47086	261 aa	Predicted RBP	4.79	□□□□□ -1.64
ATG12	YBR217W	TTI2	P47168	421 aa		4.79	□□□□□ -1.64
ATG12	YBR217W	SRL4	Q03085	281 aa		4.79	□□□□□ -1.64
ATG12	YBR217W	YDR415C	Q04033	374 aa	Predicted RBP	4.79	□□□□□ -1.64
ATG12	YBR217W	RGC1	Q06108	1083 aa	Known RBP	4.79	□□□□□ -1.64
ATG12	YBR217W	SOG2	Q08817	791 aa		4.79	□□□□□ -1.64
ATG12	YBR217W	IFM1	P25038	676 aa		4.78	□□□□□ -1.64
ATG12	YBR217W	RPL5	P26321	297 aa	Known RBP	4.78	□□□□□ -1.64
ATG12	YBR217W	RPB7	P34087	171 aa		4.78	□□□□□ -1.64
ATG12	YBR217W	IPI1	P38803	334 aa	Predicted RBP	4.78	□□□□□ -1.64
ATG12	YBR217W	FCY21	P40039	528 aa		4.78	□□□□□ -1.64
ATG12	YBR217W	ADH6	Q04894	360 aa	Known RBP	4.78	□□□□□ -1.64
ATG12	YBR217W	ARR2	Q06597	130 aa		4.78	□□□□□ -1.64
ATG12	YBR217W	MSA1	Q08471	629 aa		4.78	□□□□□ -1.64
ATG12	YBR217W	YPL199C	Q08954	240 aa		4.78	□□□□□ -1.64
ATG12	YBR217W	ALG6	Q12001	544 aa	Known RBP	4.78	□□□□□ -1.64
ATG12	YBR217W	URA3	P03962	267 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	DIT1	P21623	536 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	MSS1	P32559	526 aa	Predicted RBP	4.77	□□□□□ -1.65
ATG12	YBR217W	TCA17	P32613	152 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	CPR5	P35176	225 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	SWD2	P36104	329 aa	Predicted RBP	4.77	□□□□□ -1.65
ATG12	YBR217W	YBR197C	P38306	217 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	RPS0B	P46654	252 aa	Known RBP	4.77	□□□□□ -1.65
ATG12	YBR217W	RPA14	P50106	137 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	SOL1	P50278	321 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	YGR045C	P53229	120 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	SLX9	P53251	210 aa	Predicted RBP	4.77	□□□□□ -1.65
ATG12	YBR217W	CWC25	P53854	179 aa	Known RBP	4.77	□□□□□ -1.65
ATG12	YBR217W	YML018C	Q03730	393 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	ECM18	Q04623	453 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	BBP1	Q12365	385 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	HTZ1	Q12692	134 aa	Known RBP	4.77	□□□□□ -1.65
ATG12	YBR217W	DYN1	P36022	4092 aa		4.77	□□□□□ -1.65
ATG12	YBR217W	CYC1	P00044	109 aa	Predicted RBP	4.76	□□□□□ -1.65
ATG12	YBR217W	CKA1	P15790	372 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	SEN2	P16658	377 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	SPT14	P32363	452 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	FMT1	P32785	401 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	RIB7	P33312	244 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	REC104	P33323	182 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	SOR1	P35497	357 aa	Known RBP	4.76	□□□□□ -1.65
ATG12	YBR217W	CUE1	P38428	203 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	SSO2	P39926	295 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	PAC2	P39937	518 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	IMD3	P50095	523 aa	Known RBP	4.76	□□□□□ -1.65
ATG12	YBR217W	RSM27	P53305	110 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	ALG9	P53868	555 aa	Known RBP	4.76	□□□□□ -1.65
ATG12	YBR217W	TSA2	Q04120	196 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	TY1A-MR1	Q04215	440 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	TMA10	Q06177	86 aa		4.76	□□□□□ -1.65
ATG12	YBR217W	NOC4	Q06512	552 aa	Predicted RBP	4.76	□□□□□ -1.65
ATG12	YBR217W	SOR2	Q07786	357 aa		4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms