RNA–Protein interactions for RNA: YAL030W

SNC1, Transcript of Vesicle membrane receptor protein (v-SNARE), yeastyeast

Gene SNC1, Length 354 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol, Endoplasmic reticulum, Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNC1YAL030W RCN1P36054 211 aa1.57□□□□□ -2.16
SNC1YAL030W BMT5P40493 336 aa1.57□□□□□ -2.16
SNC1YAL030W YIL059CP40520 121 aa1.57□□□□□ -2.16
SNC1YAL030W RPA43P46669 326 aa1.57□□□□□ -2.16
SNC1YAL030W ERV29P53337 310 aa1.57□□□□□ -2.16
SNC1YAL030W RSM10Q03201 203 aa1.57□□□□□ -2.16
SNC1YAL030W GEP5Q12393 293 aa1.57□□□□□ -2.16
SNC1YAL030W ADH3P07246 375 aaKnown RBP1.56□□□□□ -2.16
SNC1YAL030W GCN3P14741 305 aa1.56□□□□□ -2.16
SNC1YAL030W APA2P22108 325 aa1.56□□□□□ -2.16
SNC1YAL030W OAC1P32332 324 aa1.56□□□□□ -2.16
SNC1YAL030W GRE3P38715 327 aaKnown RBP RIP-Chip data1.56□□□□□ -2.16not detected
SNC1YAL030W DOG2P38773 246 aa1.56□□□□□ -2.16
SNC1YAL030W DOG1P38774 246 aa1.56□□□□□ -2.16
SNC1YAL030W YER034WP40022 185 aaKnown RBP1.56□□□□□ -2.16
SNC1YAL030W FIS1P40515 155 aa1.56□□□□□ -2.16
SNC1YAL030W ARC15P40518 154 aaRIP-Chip data1.56□□□□□ -2.16not detected
SNC1YAL030W OST2P46964 130 aa1.56□□□□□ -2.16
SNC1YAL030W MMS2P53152 137 aa1.56□□□□□ -2.16
SNC1YAL030W DIA1P54005 336 aa1.56□□□□□ -2.16
SNC1YAL030W YLR179CQ06252 201 aaKnown RBP1.56□□□□□ -2.16
SNC1YAL030W YET3Q07451 203 aa1.56□□□□□ -2.16
SNC1YAL030W YNG1Q08465 219 aa1.56□□□□□ -2.16
SNC1YAL030W YOR268CQ08734 132 aa1.56□□□□□ -2.16
SNC1YAL030W YPL257WQ08974 193 aa1.56□□□□□ -2.16
SNC1YAL030W GPM2Q12008 311 aa1.56□□□□□ -2.16
SNC1YAL030W CMC2Q3E7A4 109 aa1.56□□□□□ -2.16
SNC1YAL030W RAD9P14737 1309 aa1.56□□□□□ -2.16
SNC1YAL030W YHR139C-AO13536 103 aa1.55□□□□□ -2.16
SNC1YAL030W Q0255P03881 472 aa1.55□□□□□ -2.16
SNC1YAL030W RAD10P06838 210 aa1.55□□□□□ -2.16
SNC1YAL030W DSF1P0CX08 502 aa1.55□□□□□ -2.16
SNC1YAL030W YNR073CP0CX09 502 aa1.55□□□□□ -2.16
SNC1YAL030W RPS23AP0CX29 145 aaKnown RBP1.55□□□□□ -2.16
SNC1YAL030W RPS23BP0CX30 145 aa1.55□□□□□ -2.16
SNC1YAL030W KSS1P14681 368 aa1.55□□□□□ -2.16
SNC1YAL030W MAG1P22134 296 aaKnown RBP1.55□□□□□ -2.16
SNC1YAL030W SPS18P32572 300 aa1.55□□□□□ -2.16
SNC1YAL030W MSA2P36157 363 aa1.55□□□□□ -2.16
SNC1YAL030W MRPL28P36527 147 aa1.55□□□□□ -2.16
SNC1YAL030W SHG1P38337 142 aa1.55□□□□□ -2.16
SNC1YAL030W YGP1P38616 354 aaKnown RBP1.55□□□□□ -2.16
SNC1YAL030W YAR068WP39564 161 aa1.55□□□□□ -2.16
SNC1YAL030W IRC22P40006 225 aa1.55□□□□□ -2.16
SNC1YAL030W SPO73P40031 143 aa1.55□□□□□ -2.16
SNC1YAL030W COG3P40094 801 aa1.55□□□□□ -2.16
SNC1YAL030W PFS2P42841 465 aaKnown RBP1.55□□□□□ -2.16
SNC1YAL030W YJL016WP47072 561 aa1.55□□□□□ -2.16
SNC1YAL030W RTC4P53850 401 aa1.55□□□□□ -2.16
SNC1YAL030W LSM7P53905 115 aaKnown RBP1.55□□□□□ -2.16
SNC1YAL030W YMD8Q03697 442 aa1.55□□□□□ -2.16
SNC1YAL030W PEX12Q04370 399 aa1.55□□□□□ -2.16
SNC1YAL030W FEX1Q08913 375 aa1.55□□□□□ -2.16
SNC1YAL030W NIP7Q08962 181 aaKnown RBP1.55□□□□□ -2.16
SNC1YAL030W FEX2Q08991 375 aa1.55□□□□□ -2.16
SNC1YAL030W BBP1Q12365 385 aa1.55□□□□□ -2.16
SNC1YAL030W CDC7P06243 507 aa1.54□□□□□ -2.16
SNC1YAL030W DPM1P14020 267 aaKnown RBP1.54□□□□□ -2.16
SNC1YAL030W CCA1P21269 546 aa1.54□□□□□ -2.16
SNC1YAL030W RSA4P25382 515 aaKnown RBP1.54□□□□□ -2.16
SNC1YAL030W VPS51P36116 164 aa1.54□□□□□ -2.16
SNC1YAL030W YBR063CP38083 404 aa1.54□□□□□ -2.16
SNC1YAL030W ECM33P38248 429 aaKnown RBP1.54□□□□□ -2.16
SNC1YAL030W SEC72P39742 193 aaKnown RBP1.54□□□□□ -2.16
SNC1YAL030W YER188WP40103 239 aa1.54□□□□□ -2.16
SNC1YAL030W YGR026WP53217 278 aa1.54□□□□□ -2.16
SNC1YAL030W YGR050CP53231 118 aa1.54□□□□□ -2.16
SNC1YAL030W YNL010WP53981 241 aaKnown RBP1.54□□□□□ -2.16
SNC1YAL030W GGA1Q06336 557 aa1.54□□□□□ -2.16
SNC1YAL030W YDL012CQ12489 107 aa1.54□□□□□ -2.16
SNC1YAL030W SAS5Q99314 248 aa1.54□□□□□ -2.16
SNC1YAL030W RPL25P04456 142 aaKnown RBP1.53□□□□□ -2.16
SNC1YAL030W RPL35AP0CX84 120 aaKnown RBP1.53□□□□□ -2.16
SNC1YAL030W RPL35BP0CX85 120 aaKnown RBP1.53□□□□□ -2.16
SNC1YAL030W FCY2P17064 533 aa1.53□□□□□ -2.16
SNC1YAL030W GRX2P17695 143 aaKnown RBP1.53□□□□□ -2.16
SNC1YAL030W FMT1P32785 401 aa1.53□□□□□ -2.16
SNC1YAL030W FAB1P34756 2278 aa1.53□□□□□ -2.16
SNC1YAL030W CAF4P36130 643 aa1.53□□□□□ -2.16
SNC1YAL030W POP4P38336 279 aa1.53□□□□□ -2.16
SNC1YAL030W YHR125WP38831 101 aa1.53□□□□□ -2.16
SNC1YAL030W ERG10P41338 398 aaKnown RBP1.53□□□□□ -2.16
SNC1YAL030W GON7P46984 123 aa1.53□□□□□ -2.16
SNC1YAL030W PET191Q02772 108 aa1.53□□□□□ -2.16
SNC1YAL030W LPP1Q04396 274 aa1.53□□□□□ -2.16
SNC1YAL030W GIM5Q04493 163 aa1.53□□□□□ -2.16
SNC1YAL030W CLP1Q08685 445 aaPredicted RBP1.53□□□□□ -2.16
SNC1YAL030W AKR2Q12013 749 aa1.53□□□□□ -2.16
SNC1YAL030W MDM32Q12171 622 aa1.53□□□□□ -2.16
SNC1YAL030W REP2P03872 296 aa1.52□□□□□ -2.17
SNC1YAL030W RPL9AP05738 191 aaKnown RBP1.52□□□□□ -2.17
SNC1YAL030W RPL26AP05743 127 aaKnown RBP1.52□□□□□ -2.17
SNC1YAL030W KRE1P17260 313 aa1.52□□□□□ -2.17
SNC1YAL030W SNF6P18888 332 aa1.52□□□□□ -2.17
SNC1YAL030W RAD51P25454 400 aa1.52□□□□□ -2.17
SNC1YAL030W ARC19P33204 171 aaKnown RBP1.52□□□□□ -2.17
SNC1YAL030W YKR032WP36127 104 aa1.52□□□□□ -2.17
SNC1YAL030W ECM4P36156 370 aa1.52□□□□□ -2.17
SNC1YAL030W YHL026CP38740 315 aa1.52□□□□□ -2.17
SNC1YAL030W MED6P38782 295 aa1.52□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms