RNA–Protein interactions for RNA: ENST00000639857.1

PTPN11-207, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 5 BASIC

Gene PTPN11, Length 801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-207ENST00000639857 RTL10Q7L3V2 364 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 PDILTQ8N807 584 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 CLSTN3Q9BQT9 956 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 PYM1Q9BRP8 204 aaKnown RBP19.28■□□□□ 0.68
PTPN11-207ENST00000639857 C11orf16Q9NQ32 467 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 KBTBD4Q9NVX7 518 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 MUTYHQ9UIF7 546 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 FBXW11Q9UKB1 542 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 CPSF3Q9UKF6 684 aaKnown RBP19.28■□□□□ 0.68
PTPN11-207ENST00000639857 PCDHB13Q9Y5F0 798 aa19.28■□□□□ 0.68
PTPN11-207ENST00000639857 TCHHQ07283 1943 aa19.27■□□□□ 0.68
PTPN11-207ENST00000639857 IDEP14735 1019 aa19.27■□□□□ 0.68
PTPN11-207ENST00000639857 RAB33AQ14088 237 aa19.27■□□□□ 0.68
PTPN11-207ENST00000639857 ZBTB6Q15916 424 aa19.27■□□□□ 0.68
PTPN11-207ENST00000639857 ENOX2Q16206 610 aaKnown RBP19.27■□□□□ 0.68
PTPN11-207ENST00000639857 SEZ6Q53EL9 994 aa19.27■□□□□ 0.68
PTPN11-207ENST00000639857 L1TD1Q5T7N2 865 aaKnown RBP19.27■□□□□ 0.68
PTPN11-207ENST00000639857 FOXD4L5Q5VV16 416 aaPredicted RBP19.27■□□□□ 0.68
PTPN11-207ENST00000639857 CCDC65Q8IXS2 484 aa19.27■□□□□ 0.68
PTPN11-207ENST00000639857 ZDHHC14Q8IZN3 488 aa19.27■□□□□ 0.68
PTPN11-207ENST00000639857 PLCD3Q8N3E9 789 aa19.27■□□□□ 0.68
PTPN11-207ENST00000639857 TDRD5Q8NAT2 981 aaKnown RBP19.27■□□□□ 0.68
PTPN11-207ENST00000639857 FOXD4L4Q8WXT5 416 aaPredicted RBP19.27■□□□□ 0.68
PTPN11-207ENST00000639857 C18orf25Q96B23 403 aaPredicted RBP19.27■□□□□ 0.68
PTPN11-207ENST00000639857 CDH22Q9UJ99 828 aa19.27■□□□□ 0.68
PTPN11-207ENST00000639857 DERAQ9Y315 318 aa19.27■□□□□ 0.68
PTPN11-207ENST00000639857 NUB1Q9Y5A7 615 aa19.27■□□□□ 0.68
PTPN11-207ENST00000639857 MYO10Q9HD67 2058 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 RPL17P18621 184 aaKnown RBP19.26■□□□□ 0.67
PTPN11-207ENST00000639857 PAX3P23760 479 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 HOXA9P31269 272 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 TNFSF9P41273 254 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 ME1P48163 572 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 STXBP4Q6ZWJ1 553 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 PALB2Q86YC2 1186 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 KREMEN2Q8NCW0 462 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 STAMQ92783 540 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 EDAQ92838 391 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 KIF12Q96FN5 646 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 SUSD3Q96L08 255 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 ACCSQ96QU6 501 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 LRFN3Q9BTN0 628 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 PANK2Q9BZ23 570 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 ASB7Q9H672 318 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 PANK4Q9NVE7 773 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 FAM13BQ9NYF5 915 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 DOCK8Q8NF50 2099 aa19.26■□□□□ 0.67
PTPN11-207ENST00000639857 CCDC195A0A1B0GUA6 201 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 ANKRD63C9JTQ0 380 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 ZMYND10O75800 440 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 GCNT3O95395 438 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 POU2F2P09086 479 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 HNRNPA1P09651 372 aaKnown RBP eCLIP19.25■□□□□ 0.67
PTPN11-207ENST00000639857 WEE2P0C1S8 567 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 TKTP29401 623 aaKnown RBP19.25■□□□□ 0.67
PTPN11-207ENST00000639857 BRCC3P46736 316 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 PTPN21Q16825 1174 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 LIN9Q5TKA1 542 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 ADALQ6DHV7 355 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 KANK3Q6NY19 840 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 OTOP3Q7RTS5 596 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 SPRYD3Q8NCJ5 442 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 ACSF2Q96CM8 615 aaPredicted RBP19.25■□□□□ 0.67
PTPN11-207ENST00000639857 TRIM9Q9C026 710 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 WDR6Q9NNW5 1121 aaKnown RBP19.25■□□□□ 0.67
PTPN11-207ENST00000639857 TSHZ2Q9NRE2 1034 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 TUBGCP4Q9UGJ1 667 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 RCOR1Q9UKL0 485 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 AGO2Q9UKV8 859 aaKnown RBP19.25■□□□□ 0.67
PTPN11-207ENST00000639857 PCDHA7Q9UN72 937 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 C2CD2Q9Y426 696 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 TECTAO75443 2155 aa19.25■□□□□ 0.67
PTPN11-207ENST00000639857 LACTBL1A8MY62 500 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 C2CD4DB7Z1M9 353 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 H7C4K7 107 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 MCM4P33991 863 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 DNM1Q05193 864 aaKnown RBP19.24■□□□□ 0.67
PTPN11-207ENST00000639857 UVSSAQ2YD98 709 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 ZBTB41Q5SVQ8 909 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 SPATA1Q5VX52 437 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 RESP18Q5W5W9 173 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 SLC8B1Q6J4K2 584 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 GLYCTKQ8IVS8 523 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 APPL2Q8NEU8 664 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 POMGNT1Q8WZA1 660 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 SMG7Q92540 1137 aaKnown RBP19.24■□□□□ 0.67
PTPN11-207ENST00000639857 DHX58Q96C10 678 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 ZNF707Q96C28 371 aaPredicted RBP19.24■□□□□ 0.67
PTPN11-207ENST00000639857 PRKD2Q9BZL6 878 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 TMEM206Q9H813 350 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 ATP6V1DQ9Y5K8 247 aa19.24■□□□□ 0.67
PTPN11-207ENST00000639857 TSC2P49815 1807 aa19.23■□□□□ 0.67
PTPN11-207ENST00000639857 RFPL2O75678 378 aa19.23■□□□□ 0.67
PTPN11-207ENST00000639857 GARTP22102 1010 aa19.23■□□□□ 0.67
PTPN11-207ENST00000639857 IGFBP6P24592 240 aaPredicted RBP19.23■□□□□ 0.67
PTPN11-207ENST00000639857 OR1D2P34982 312 aa19.23■□□□□ 0.67
PTPN11-207ENST00000639857 AARSP49588 968 aaKnown RBP eCLIP19.23■□□□□ 0.67
PTPN11-207ENST00000639857 ZXDAP98168 799 aa19.23■□□□□ 0.67
PTPN11-207ENST00000639857 MRPL58Q14197 206 aaKnown RBP19.23■□□□□ 0.67
PTPN11-207ENST00000639857 FOXD4L6Q3SYB3 417 aaPredicted RBP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms