RNA–Protein interactions for RNA: ENST00000639167.1

NECAP1-216, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,197 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-216ENST00000639167 GJC1P36383 396 aa11.32□□□□□ -0.6
NECAP1-216ENST00000639167 NSFP46459 744 aaKnown RBP11.32□□□□□ -0.6
NECAP1-216ENST00000639167 IFI35P80217 286 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-216ENST00000639167 KRT17Q04695 432 aa11.32□□□□□ -0.6
NECAP1-216ENST00000639167 TRIP13Q15645 432 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-216ENST00000639167 QPCTQ16769 361 aa11.32□□□□□ -0.6
NECAP1-216ENST00000639167 TTC31Q49AM3 519 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-216ENST00000639167 CHADLQ6NUI6 762 aa11.32□□□□□ -0.6
NECAP1-216ENST00000639167 TMEM270Q6UE05 265 aa11.32□□□□□ -0.6
NECAP1-216ENST00000639167 EPS8L3Q8TE67 593 aaKnown RBP11.32□□□□□ -0.6
NECAP1-216ENST00000639167 FAM118BQ9BPY3 351 aa11.32□□□□□ -0.6
NECAP1-216ENST00000639167 SELENOSQ9BQE4 189 aa11.32□□□□□ -0.6
NECAP1-216ENST00000639167 RBAKQ9NYW8 714 aaPredicted RBP11.32□□□□□ -0.6
NECAP1-216ENST00000639167 PARP2Q9UGN5 583 aa11.32□□□□□ -0.6
NECAP1-216ENST00000639167 PCDHB4Q9Y5E5 795 aa11.32□□□□□ -0.6
NECAP1-216ENST00000639167 PCDHB2Q9Y5E7 798 aa11.32□□□□□ -0.6
NECAP1-216ENST00000639167 TRAPPC3O43617 180 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 KIAA0754O94854 1291 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 FNTAP49354 379 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 IFT88Q13099 833 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 STXBP2Q15833 593 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 OR5B17Q8NGF7 314 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 ART4Q93070 314 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 MSTO1Q9BUK6 570 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 HEMGNQ9BXL5 484 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 PORCNQ9H237 461 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 LRRC19Q9H756 370 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 KIAA1586Q9HCI6 787 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 DNAJC17Q9NVM6 304 aaKnown RBP11.31□□□□□ -0.6
NECAP1-216ENST00000639167 FBXO40Q9UH90 709 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 KCNG1Q9UIX4 513 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 H0YCG3 227 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 RGS16O15492 202 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-216ENST00000639167 MEFVO15553 781 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-216ENST00000639167 RIPK2O43353 540 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 CYP1A1P04798 512 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-216ENST00000639167 ACO1P21399 889 aaKnown RBP11.31□□□□□ -0.6
NECAP1-216ENST00000639167 CLDN10P78369 228 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 CALCOCO2Q13137 446 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 RNF187Q5TA31 235 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-216ENST00000639167 DLK2Q6UY11 383 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 CCDC50Q8IVM0 306 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 ANKRD35Q8N283 1001 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 OTUD6BQ8N6M0 293 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 C12orf50Q8NA57 414 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-216ENST00000639167 KLRG1Q96E93 195 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 CEP89Q96ST8 783 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 DHX33Q9H6R0 707 aaKnown RBP11.31□□□□□ -0.6
NECAP1-216ENST00000639167 AVENQ9NQS1 362 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-216ENST00000639167 GGA3Q9NZ52 723 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 ASIC3Q9UHC3 531 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 USTQ9Y2C2 406 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 MAFBQ9Y5Q3 323 aaPredicted RBP11.31□□□□□ -0.6
NECAP1-216ENST00000639167 MYH9P35579 1960 aaKnown RBP11.31□□□□□ -0.6
NECAP1-216ENST00000639167 UTRNP46939 3433 aa11.31□□□□□ -0.6
NECAP1-216ENST00000639167 TTLL13PA6NNM8 815 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 ATP2A1O14983 1001 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 GNA15P30679 374 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 GBP1P32455 592 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 CHKAP35790 457 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 SSR1P43307 286 aaKnown RBP11.3□□□□□ -0.6
NECAP1-216ENST00000639167 NAMPTP43490 491 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 VPS41P49754 854 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 CENPCQ03188 943 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 SF3A3Q12874 501 aaKnown RBP eCLIP11.3□□□□□ -0.6
NECAP1-216ENST00000639167 CUL2Q13617 745 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 BYSLQ13895 437 aaKnown RBP11.3□□□□□ -0.6
NECAP1-216ENST00000639167 MMS22LQ6ZRQ5 1243 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 MICALCLQ6ZW33 695 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 MON1BQ7L1V2 547 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 ZNF677Q86XU0 584 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 SLC7A3Q8WY07 619 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 DDX27Q96GQ7 796 aaKnown RBP11.3□□□□□ -0.6
NECAP1-216ENST00000639167 CCDC114Q96M63 670 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 RUNDC3BQ96NL0 473 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 DDX23Q9BUQ8 820 aaKnown RBP11.3□□□□□ -0.6
NECAP1-216ENST00000639167 HOXC10Q9NYD6 342 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 R3HDM2Q9Y2K5 976 aaKnown RBP11.3□□□□□ -0.6
NECAP1-216ENST00000639167 NUB1Q9Y5A7 615 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 STYXL1Q9Y6J8 313 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 SRRM3A6NNA2 597 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-216ENST00000639167 THAP12O43422 761 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 STAM2O75886 525 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 PROSCO94903 275 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 RARGP13631 454 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 CHN1P15882 459 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 NF2P35240 595 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 ARL2P36404 184 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 TAS2R40P59535 323 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 BPIFB4P59827 614 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 SLC20A2Q08357 652 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 DRP2Q13474 957 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 SLMAPQ14BN4 828 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 FAM43BQ6ZT52 329 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-216ENST00000639167 EEPD1Q7L9B9 569 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 RBBP8NLQ8NC74 664 aaPredicted RBP11.3□□□□□ -0.6
NECAP1-216ENST00000639167 PCYT2Q99447 389 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 PAGR1Q9BTK6 254 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 PLVAPQ9BX97 442 aa11.3□□□□□ -0.6
NECAP1-216ENST00000639167 CCDC113Q9H0I3 377 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms