RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 IL31RAQ8NI17 732 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 MAML1Q92585 1016 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 TMEM237Q96Q45 408 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 RANBP17Q9H2T7 1088 aaKnown RBP11.61□□□□□ -0.55
SNIP1-204ENST00000638725 TMEM8AQ9HCN3 771 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 KCNH7Q9NS40 1196 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 RAB20Q9NX57 234 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.61□□□□□ -0.55
SNIP1-204ENST00000638725 COQ4Q9Y3A0 265 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 ATRNL1Q5VV63 1379 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 SLX4Q8IY92 1834 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 LOXHD1Q8IVV2 1947 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 CCDC189A1A4V9 331 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 FAM47DPA6NHR8 397 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 UNGP13051 313 aaPredicted RBP11.61□□□□□ -0.55
SNIP1-204ENST00000638725 SKIV2L2P42285 1042 aaKnown RBP11.61□□□□□ -0.55
SNIP1-204ENST00000638725 TRAF1Q13077 416 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 KLF1Q13351 362 aaPredicted RBP11.61□□□□□ -0.55
SNIP1-204ENST00000638725 PODNQ7Z5L7 613 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 CNKSR1Q969H4 720 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 GRAMD1AQ96CP6 724 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 CCDC77Q9BR77 488 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 KIF9Q9HAQ2 790 aa11.61□□□□□ -0.55
SNIP1-204ENST00000638725 DHX15O43143 795 aaKnown RBP11.6□□□□□ -0.55
SNIP1-204ENST00000638725 TARSP26639 723 aaKnown RBP11.6□□□□□ -0.55
SNIP1-204ENST00000638725 MAGEA4P43358 317 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 CENPCQ03188 943 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 CCDC15Q0P6D6 951 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 UGCGQ16739 394 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 DACT2Q5SW24 774 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 ANKS1BQ7Z6G8 1248 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 VSIG1Q86XK7 387 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 ANKRD35Q8N283 1001 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 SLC17A8Q8NDX2 589 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 RBM15Q96T37 977 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNIP1-204ENST00000638725 SLCO1B3Q9NPD5 702 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 FBXO28Q9NVF7 368 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 NKX1-2Q9UD57 310 aaPredicted RBP11.6□□□□□ -0.55
SNIP1-204ENST00000638725 CHKBQ9Y259 395 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 ACTL7BQ9Y614 415 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.6□□□□□ -0.55
SNIP1-204ENST00000638725 ANKRD31Q8N7Z5 1873 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 MYPNQ86TC9 1320 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 ASMTLO95671 621 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 FDX1P10109 184 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 GCAP28676 217 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 YWHABP31946 246 aaKnown RBP11.6□□□□□ -0.55
SNIP1-204ENST00000638725 POLGP54098 1239 aaPredicted RBP11.6□□□□□ -0.55
SNIP1-204ENST00000638725 NCKAP1LP55160 1127 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 TAS2R40P59535 323 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 RNASELQ05823 741 aaKnown RBP11.6□□□□□ -0.55
SNIP1-204ENST00000638725 HP1BP3Q5SSJ5 553 aaPredicted RBP11.6□□□□□ -0.55
SNIP1-204ENST00000638725 FAM102BQ5T8I3 360 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 SV2AQ7L0J3 742 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 LDHDQ86WU2 507 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 CCDC89Q8N998 374 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 TXLNGQ9NUQ3 528 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 COL20A1Q9P218 1284 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 HAO1Q9UJM8 370 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 PHTF1Q9UMS5 762 aa11.6□□□□□ -0.55
SNIP1-204ENST00000638725 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.6□□□□□ -0.55
SNIP1-204ENST00000638725 UMODL1Q5DID0 1318 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 EXOC1LA0A1B0GW35 172 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 EIF4E1BA6NMX2 242 aaKnown RBP11.59□□□□□ -0.55
SNIP1-204ENST00000638725 CD58P19256 250 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 CNGA1P29973 690 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 QARSP47897 775 aaKnown RBP11.59□□□□□ -0.55
SNIP1-204ENST00000638725 P3H1Q32P28 736 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 PLA2G4FQ68DD2 849 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 MIS18BP1Q6P0N0 1132 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 CAPN12Q6ZSI9 719 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 TRABD2AQ86V40 505 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 GLIS1Q8NBF1 620 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 SPDL1Q96EA4 605 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 RAB3IPQ96QF0 476 aaPredicted RBP11.59□□□□□ -0.55
SNIP1-204ENST00000638725 FAM167BQ9BTA0 163 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 MRIQ9BWK5 157 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 ST6GALNAC4Q9H4F1 302 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.59□□□□□ -0.55
SNIP1-204ENST00000638725 SAYSD1Q9NPB0 183 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 AVENQ9NQS1 362 aaPredicted RBP11.59□□□□□ -0.55
SNIP1-204ENST00000638725 GRID1Q9ULK0 1009 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 TMX2Q9Y320 296 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 SCN9AQ15858 1988 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 ASTN2O75129 1339 aaPredicted RBP11.59□□□□□ -0.55
SNIP1-204ENST00000638725 POC1B-GALNT4F8VUJ3 575 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 NPM3O75607 178 aaKnown RBP11.59□□□□□ -0.55
SNIP1-204ENST00000638725 SLC1A1P43005 524 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 SETDB1Q15047 1291 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 PKN2Q16513 984 aaKnown RBP11.59□□□□□ -0.55
SNIP1-204ENST00000638725 CCNG2Q16589 344 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 STRIP1Q5VSL9 837 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 GSTA5Q7RTV2 222 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 C4orf33Q8N1A6 199 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 MICAL1Q8TDZ2 1067 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 ADAM33Q9BZ11 813 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 OSBPL8Q9BZF1 889 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 KLHL11Q9NVR0 708 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 TBX20Q9UMR3 447 aa11.59□□□□□ -0.55
SNIP1-204ENST00000638725 STARD13Q9Y3M8 1113 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms