RNA–Protein interactions for RNA: ENST00000637432.1

CACNA1A-240, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,809 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-240ENST00000637432 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 ENO3P13929 434 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 HMGCS2P54868 508 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 MRPL39Q9NYK5 338 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 KIF1BO60333 1816 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 USP17L15C9J2P7 530 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 USP17L13C9JLJ4 530 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 USP17L11C9JVI0 530 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 USP17L18D6R9N7 530 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 USP17L22D6RA61 530 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 USP17L17D6RBQ6 530 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 USP17L19D6RCP7 530 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 USP17L20D6RJB6 530 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 DGKIO75912 1065 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 USP17L24Q0WX57 530 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 USP17L6PQ6QN14 398 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 MACC1Q6ZN28 852 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 CYP4X1Q8N118 509 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 RBM41Q96IZ5 413 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 PBKQ96KB5 322 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 ARHGEF38Q9NXL2 777 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 KLK14Q9P0G3 267 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 SGSM2O43147 1006 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 MARSP56192 900 aaKnown RBP17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 ZNF658Q5TYW1 1059 aaPredicted RBP17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 FAM49BQ9NUQ9 324 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 MYO1CO00159 1063 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 GATAD2AQ86YP4 633 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 MYRIPQ8NFW9 859 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 PIF1Q9H611 641 aa17.03■□□□□ 0.32
CACNA1A-240ENST00000637432 ITGA4P13612 1032 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 NOS3P29474 1203 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 PRIM2P49643 509 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 CCR4P51679 360 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 EPHB4P54760 987 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 R3HCC1LQ7Z5L2 792 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 LCORLQ8N3X6 602 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 MMGT1Q8N4V1 131 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 FAM167AQ96KS9 214 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 VCLP18206 1134 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 IPMKQ8NFU5 416 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 VPS50Q96JG6 964 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 OLFML3Q9NRN5 406 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 NFU1Q9UMS0 254 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 E9PBE3 544 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 CHRNA5P30532 468 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 PDIA2Q13087 525 aaKnown RBP17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 CEP55Q53EZ4 464 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 PRELPP51888 382 aa17.02■□□□□ 0.32
CACNA1A-240ENST00000637432 ENO1P06733 434 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 GALNTL6Q49A17 601 aa17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 TMEM35BQ8NCS4 154 aa17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 LIMA1Q9UHB6 759 aaKnown RBP17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 CAND2O75155 1236 aa17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 PDE8BO95263 885 aa17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 STARD3Q14849 445 aa17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 DCAF6Q58WW2 860 aa17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 C6orf118Q5T5N4 469 aa17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 PODNQ7Z5L7 613 aa17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 RNF180Q86T96 592 aa17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 BTBD9Q96Q07 612 aa17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 KRCC1Q9NPI7 259 aaPredicted RBP17.02■□□□□ 0.31
CACNA1A-240ENST00000637432 KRT38O76015 456 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 DSG3P32926 999 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 PEX5P50542 639 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 BCAR1P56945 870 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 HUNKP57058 714 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 HIST2H2ACQ16777 129 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 HIST2H2AA3Q6FI13 130 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 NAGPAQ9UK23 515 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 PALMO75781 387 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 CNGA3Q16281 694 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 SNX30Q5VWJ9 437 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 ANAPC2Q9UJX6 822 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 LAMC3Q9Y6N6 1575 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 ABCB1P08183 1280 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 PYGMP11217 842 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 SKIV2L2P42285 1042 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 POLD3Q15054 466 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 TMEM169Q96HH4 297 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 KATNAL1Q9BW62 490 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 CRLS1Q9UJA2 301 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 DNAJC12Q9UKB3 198 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 ABCC12Q96J65 1359 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 LAD1O00515 517 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 PQBP1O60828 265 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 VAMP7P51809 220 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 LLGL2Q6P1M3 1020 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 SNX9Q9Y5X1 595 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 CALB1P05937 261 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 KYNUQ16719 465 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 TDRD10Q5VZ19 366 aaKnown RBP17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 BRIP1Q9BX63 1249 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 MYL4P12829 197 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 PADI6Q6TGC4 694 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 GLB1LQ6UWU2 654 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 RNF44Q7L0R7 432 aa17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 CDR2LQ86X02 465 aaPredicted RBP17.01■□□□□ 0.31
CACNA1A-240ENST00000637432 CSGALNACT1Q8TDX6 532 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms