RNA–Protein interactions for RNA: ENST00000635682.1

HSPG2-214, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 921 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-214ENST00000635682 UBALD2Q8IYN6 164 aa16.11■□□□□ 0.17
HSPG2-214ENST00000635682 ZDHHC14Q8IZN3 488 aa16.11■□□□□ 0.17
HSPG2-214ENST00000635682 NOC3LQ8WTT2 800 aaKnown RBP16.11■□□□□ 0.17
HSPG2-214ENST00000635682 POMGNT1Q8WZA1 660 aa16.11■□□□□ 0.17
HSPG2-214ENST00000635682 PRRX2Q99811 253 aa16.11■□□□□ 0.17
HSPG2-214ENST00000635682 BLZF1Q9H2G9 400 aa16.11■□□□□ 0.17
HSPG2-214ENST00000635682 SFXN1Q9H9B4 322 aa16.11■□□□□ 0.17
HSPG2-214ENST00000635682 RPF1Q9H9Y2 349 aaKnown RBP16.11■□□□□ 0.17
HSPG2-214ENST00000635682 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.11■□□□□ 0.17
HSPG2-214ENST00000635682 PVALEFA0A1B0GWK0 134 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 OGTO15294 1046 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 TADA2AO75478 443 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 PIGRP01833 764 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 SOD2P04179 222 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 URODP06132 367 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 PROZP22891 400 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 NDUFA8P51970 172 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 RABGGTAQ92696 567 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 KCNN1Q92952 543 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 FAM212AQ96EL1 285 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 ZBTB45Q96K62 511 aaPredicted RBP16.1■□□□□ 0.17
HSPG2-214ENST00000635682 UROC1Q96N76 676 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 HERC2P3Q9BVR0 1158 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 PTPRHQ9HD43 1115 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 SSX2IPQ9Y2D8 614 aa16.1■□□□□ 0.17
HSPG2-214ENST00000635682 ZFHX2Q9C0A1 2572 aaPredicted RBP16.09■□□□□ 0.17
HSPG2-214ENST00000635682 FRMD3A2A2Y4 597 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 CASTOR2A6NHX0 329 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 TEX28O15482 410 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 KIF20AO95235 890 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 LDHAP00338 332 aaKnown RBP16.09■□□□□ 0.17
HSPG2-214ENST00000635682 SPATA31D3P0C874 917 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 DSC1Q08554 894 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 GLRA4Q5JXX5 417 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 KIAA0319Q5VV43 1072 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 CNNM4Q6P4Q7 775 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 SPATA31D4Q6ZUB0 917 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 PLCD3Q8N3E9 789 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 CEP120Q8N960 986 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 PAGE5Q96GU1 130 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 B3GALT6Q96L58 329 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 SNX27Q96L92 541 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 PLEKHA5Q9HAU0 1116 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 MAN1C1Q9NR34 630 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 AGO2Q9UKV8 859 aaKnown RBP16.09■□□□□ 0.17
HSPG2-214ENST00000635682 HPSEQ9Y251 543 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 USTQ9Y2C2 406 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 PLXNA3P51805 1871 aa16.09■□□□□ 0.17
HSPG2-214ENST00000635682 DENND4AQ7Z401 1863 aa16.08■□□□□ 0.17
HSPG2-214ENST00000635682 H0Y858 1186 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 EIF3DO15371 548 aaKnown RBP eCLIP16.08■□□□□ 0.163e-6■□□□□ 9.2
HSPG2-214ENST00000635682 ACTN4O43707 911 aaKnown RBP16.08■□□□□ 0.16
HSPG2-214ENST00000635682 ZNF202O95125 648 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 GLUD2P49448 558 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 ELAVL2Q12926 359 aaKnown RBP16.08■□□□□ 0.16
HSPG2-214ENST00000635682 CUL4BQ13620 913 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 ARMCX5Q6P1M9 558 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 KRBA2Q6ZNG9 492 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 CCDC149Q6ZUS6 474 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 HS2ST1Q7LGA3 356 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 PALB2Q86YC2 1186 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 GLYCTKQ8IVS8 523 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 CD302Q8IX05 232 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 GRAMD1CQ8IYS0 662 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 GSTCDQ8NEC7 633 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 ATOH1Q92858 354 aaPredicted RBP16.08■□□□□ 0.16
HSPG2-214ENST00000635682 ACSF2Q96CM8 615 aaPredicted RBP16.08■□□□□ 0.16
HSPG2-214ENST00000635682 DDX27Q96GQ7 796 aaKnown RBP16.08■□□□□ 0.16
HSPG2-214ENST00000635682 FIZ1Q96SL8 496 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 SF3B1O75533 1304 aaKnown RBP eCLIP16.08■□□□□ 0.16
HSPG2-214ENST00000635682 UBE4BO95155 1302 aa16.08■□□□□ 0.16
HSPG2-214ENST00000635682 SMIM28A0A1B0GU29 152 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 CCDC195A0A1B0GUA6 201 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 KIAA0391O15091 583 aaKnown RBP16.07■□□□□ 0.16
HSPG2-214ENST00000635682 TRAPPC3O43617 180 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 PRPF6O94906 941 aaKnown RBP16.07■□□□□ 0.16
HSPG2-214ENST00000635682 EFEMP2O95967 443 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 ADH1AP07327 375 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 PSMD2Q13200 908 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 SEZ6Q53EL9 994 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 ELMSAN1Q6PJG2 1045 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 OTOP3Q7RTS5 596 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 RNF168Q8IYW5 571 aaPredicted RBP16.07■□□□□ 0.16
HSPG2-214ENST00000635682 TMEM105Q8N8V8 129 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 KIF12Q96FN5 646 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 GPR62Q9BZJ7 368 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 CACNG4Q9UBN1 327 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 ADAM28Q9UKQ2 775 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 NUB1Q9Y5A7 615 aa16.07■□□□□ 0.16
HSPG2-214ENST00000635682 A0A0B4J269 797 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 PTGESO14684 152 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 KINO60870 393 aaKnown RBP16.06■□□□□ 0.16
HSPG2-214ENST00000635682 RFPL2O75678 378 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 GLUD1P00367 558 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 CXCL8P10145 99 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 GARTP22102 1010 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 CASP1P29466 404 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 DSG1Q02413 1049 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 CREMQ03060 361 aa16.06■□□□□ 0.16
HSPG2-214ENST00000635682 FAM160A1Q05DH4 1040 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms