RNA–Protein interactions for RNA: ENST00000631210.1

MECP2-220, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 1 (best)

Gene MECP2, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-220ENST00000631210 DLATP10515 647 aaKnown RBP9.01□□□□□ -0.97
MECP2-220ENST00000631210 KCNJ6P48051 423 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 GCLMP48507 274 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 SLC11A1P49279 550 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 FMO5P49326 533 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 YARSP54577 528 aaKnown RBP9.01□□□□□ -0.97
MECP2-220ENST00000631210 KCNH2Q12809 1159 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 GRIK3Q13003 919 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 TMEM132DQ14C87 1099 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 SURF1Q15526 300 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 MAN2A1Q16706 1144 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 CCDC40Q4G0X9 1142 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 VWA3BQ502W6 1294 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 EPC2Q52LR7 807 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 CHRDL2Q6WN34 429 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 TRAPPC11Q7Z392 1133 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 NT5DC4Q86YG4 428 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 CMTR2Q8IYT2 770 aaKnown RBP9.01□□□□□ -0.97
MECP2-220ENST00000631210 HACE1Q8IYU2 909 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 RABGGTAQ92696 567 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 RNPC3Q96LT9 517 aaKnown RBP9.01□□□□□ -0.97
MECP2-220ENST00000631210 XYLT2Q9H1B5 865 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 RTN4Q9NQC3 1192 aaKnown RBP9.01□□□□□ -0.97
MECP2-220ENST00000631210 MARCH5Q9NX47 278 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 DPP3Q9NY33 737 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 LRFN2Q9ULH4 789 aa9.01□□□□□ -0.97
MECP2-220ENST00000631210 UBQLN1Q9UMX0 589 aaKnown RBP9.01□□□□□ -0.97
MECP2-220ENST00000631210 A0A1B0GTH6 734 aa9□□□□□ -0.97
MECP2-220ENST00000631210 CASTOR2A6NHX0 329 aa9□□□□□ -0.97
MECP2-220ENST00000631210 LGALS16A8MUM7 142 aa9□□□□□ -0.97
MECP2-220ENST00000631210 BECN2A8MW95 431 aa9□□□□□ -0.97
MECP2-220ENST00000631210 TEX33O43247 280 aa9□□□□□ -0.97
MECP2-220ENST00000631210 HOXA2O43364 376 aa9□□□□□ -0.97
MECP2-220ENST00000631210 GALTP07902 379 aa9□□□□□ -0.97
MECP2-220ENST00000631210 KRT13P13646 458 aa9□□□□□ -0.97
MECP2-220ENST00000631210 TNNI1P19237 187 aa9□□□□□ -0.97
MECP2-220ENST00000631210 GTF2H1P32780 548 aa9□□□□□ -0.97
MECP2-220ENST00000631210 PBX1P40424 430 aa9□□□□□ -0.97
MECP2-220ENST00000631210 PBX2P40425 430 aa9□□□□□ -0.97
MECP2-220ENST00000631210 PBX3P40426 434 aa9□□□□□ -0.97
MECP2-220ENST00000631210 AARSP49588 968 aaKnown RBP eCLIP9□□□□□ -0.97
MECP2-220ENST00000631210 CLCNKBP51801 687 aa9□□□□□ -0.97
MECP2-220ENST00000631210 TFAMQ00059 246 aaKnown RBP9□□□□□ -0.97
MECP2-220ENST00000631210 FANCCQ00597 558 aa9□□□□□ -0.97
MECP2-220ENST00000631210 TUSC3Q13454 348 aa9□□□□□ -0.97
MECP2-220ENST00000631210 NR1I3Q14994 352 aa9□□□□□ -0.97
MECP2-220ENST00000631210 PTPN21Q16825 1174 aa9□□□□□ -0.97
MECP2-220ENST00000631210 UPP1Q16831 310 aa9□□□□□ -0.97
MECP2-220ENST00000631210 TPD52L1Q16890 204 aaPredicted RBP9□□□□□ -0.97
MECP2-220ENST00000631210 DUOXA2Q1HG44 320 aa9□□□□□ -0.97
MECP2-220ENST00000631210 PAN2Q504Q3 1202 aaKnown RBP9□□□□□ -0.97
MECP2-220ENST00000631210 DCAF17Q5H9S7 520 aaPredicted RBP9□□□□□ -0.97
MECP2-220ENST00000631210 C9orf57Q5W0N0 161 aa9□□□□□ -0.97
MECP2-220ENST00000631210 FAM114A1Q8IWE2 563 aa9□□□□□ -0.97
MECP2-220ENST00000631210 TDHQ8IZJ6 230 aa9□□□□□ -0.97
MECP2-220ENST00000631210 TAS1R2Q8TE23 839 aa9□□□□□ -0.97
MECP2-220ENST00000631210 RSPH1Q8WYR4 309 aa9□□□□□ -0.97
MECP2-220ENST00000631210 CLP1Q92989 425 aaKnown RBP9□□□□□ -0.97
MECP2-220ENST00000631210 RAD9AQ99638 391 aa9□□□□□ -0.97
MECP2-220ENST00000631210 ANP32EQ9BTT0 268 aa9□□□□□ -0.97
MECP2-220ENST00000631210 VN1R3Q9BXE9 311 aa9□□□□□ -0.97
MECP2-220ENST00000631210 VPS16Q9H269 839 aa9□□□□□ -0.97
MECP2-220ENST00000631210 NDST4Q9H3R1 872 aa9□□□□□ -0.97
MECP2-220ENST00000631210 APOBEC3GQ9HC16 384 aaKnown RBP9□□□□□ -0.97
MECP2-220ENST00000631210 TMEM8AQ9HCN3 771 aa9□□□□□ -0.97
MECP2-220ENST00000631210 SIX2Q9NPC8 291 aa9□□□□□ -0.97
MECP2-220ENST00000631210 KANSL3Q9P2N6 904 aa9□□□□□ -0.97
MECP2-220ENST00000631210 SIK3Q9Y2K2 1263 aa9□□□□□ -0.97
MECP2-220ENST00000631210 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9□□□□□ -0.97
MECP2-220ENST00000631210 NLRC5Q86WI3 1866 aa9□□□□□ -0.97
MECP2-220ENST00000631210 VWA8A3KMH1 1905 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 TSC2P49815 1807 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 CDH23Q9H251 3354 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 LINC01553A4QN01 128 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 TMEM189-UBE2V1I3L0A0 370 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 KIF4AO95239 1232 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 STAU1O95793 577 aaKnown RBP8.99□□□□□ -0.97
MECP2-220ENST00000631210 ASS1P00966 412 aaKnown RBP8.99□□□□□ -0.97
MECP2-220ENST00000631210 HLA-DRAP01903 254 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 AFPP02771 609 aaKnown RBP8.99□□□□□ -0.97
MECP2-220ENST00000631210 ITGB3P05106 788 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 POLR2BP30876 1174 aaKnown RBP8.99□□□□□ -0.97
MECP2-220ENST00000631210 MTIF2P46199 727 aaKnown RBP8.99□□□□□ -0.97
MECP2-220ENST00000631210 KLK7P49862 253 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 AP3M2P53677 418 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 MYL6P60660 151 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 APBA1Q02410 837 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 HSP90AA2PQ14568 343 aaPredicted RBP8.99□□□□□ -0.97
MECP2-220ENST00000631210 SARM1Q6SZW1 724 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 LIMS2Q7Z4I7 341 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 RNF168Q8IYW5 571 aaPredicted RBP8.99□□□□□ -0.97
MECP2-220ENST00000631210 LRRC43Q8N309 656 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 URGCPQ8TCY9 931 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 FNBP1Q96RU3 617 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 RPS6KC1Q96S38 1066 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 TMEM175Q9BSA9 504 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 MRPL9Q9BYD2 267 aaKnown RBP8.99□□□□□ -0.97
MECP2-220ENST00000631210 PBX4Q9BYU1 374 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 MMRN2Q9H8L6 949 aa8.99□□□□□ -0.97
MECP2-220ENST00000631210 VRTNQ9H8Y1 702 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms