RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ATP1A1P05023 1023 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 IKZF4Q9H2S9 585 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 TMEM134Q9H6X4 195 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 ARFGAP3Q9NP61 516 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 MTUS1Q9ULD2 1270 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 CEP83Q9Y592 693 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 IGKV6D-21A0A0A0MT36 114 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 AMHP03971 560 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 AXLP30530 894 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 SSR1P43307 286 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 POLR2FP61218 127 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 ABHD8Q96I13 439 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 SNX25Q9H3E2 840 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 PHF24Q9UPV7 400 aa13.38□□□□□ -0.27
SYNGAP1-207ENST00000628646 NOL4O94818 638 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 ZNF699Q32M78 642 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 MAP3K21Q5TCX8 1036 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 USP38Q8NB14 1042 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 LPPQ93052 612 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 RUFY1Q96T51 708 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 GAD1Q99259 594 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 KCTD10Q9H3F6 313 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 LRRN2O75325 713 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 TADA2AO75478 443 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 GARTP22102 1010 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 MAGEA1P43355 309 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 SLC8A3P57103 927 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 YWHAEP62258 255 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 BTG3Q14201 252 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 WHAMMP3Q1A5X7 153 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 SFMBT2Q5VUG0 894 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 RRAGAQ7L523 313 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 MED10Q9BTT4 135 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 EDEM3Q9BZQ6 932 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 PCDHB2Q9Y5E7 798 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 CKBP12277 381 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 CST5P28325 142 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 GTF2BQ00403 316 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 MKRN4PQ13434 485 aaPredicted RBP13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 HGSNATQ68CP4 663 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 DAW1Q8N136 415 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 KLHDC9Q8NEP7 349 aa13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 UPF3AQ9H1J1 476 aaKnown RBP13.37□□□□□ -0.27
SYNGAP1-207ENST00000628646 ALDH7A1P49419 539 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 RAB27AP51159 221 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 LONRF2Q1L5Z9 754 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 LHX8Q68G74 356 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 KRT39Q6A163 491 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 B3GNT9Q6UX72 402 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 OR6B3Q8NGW1 331 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 FTHL17Q9BXU8 183 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 HOXA2O43364 376 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 HUS1O60921 280 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 RECQL4O94761 1208 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 MCF2P10911 925 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 MARSP56192 900 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 TARBP2Q15633 366 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 ZNF394Q53GI3 561 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 SERINC5Q86VE9 423 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 CEP120Q8N960 986 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 ANKLE1Q8NAG6 615 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 RPGRIP1Q96KN7 1286 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 RSAD1Q9HA92 442 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 L1RE1Q9UN81 338 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 ENC1O14682 589 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 B3GAT3O94766 335 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 FGBP02675 491 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 HOXD13P35453 343 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 SNRPFP62306 86 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 CAP1Q01518 475 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 ASIC2Q16515 512 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 TSHZ1Q6ZSZ6 1077 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 UBE2TQ9NPD8 197 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 SLC38A7Q9NVC3 462 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 PCDHB4Q9Y5E5 795 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 COL11A1P12107 1806 aaPredicted RBP13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 MYH10P35580 1976 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 THP07101 528 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 CDR1P51861 262 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 VSNL1P62760 191 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 PPIGQ13427 754 aaKnown RBP eCLIP13.36□□□□□ -0.272e-7■■■■□ 22.3
SYNGAP1-207ENST00000628646 BRD3Q15059 726 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 WDR72Q3MJ13 1102 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 ACO2Q99798 780 aaKnown RBP13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 CDT1Q9H211 546 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 SALL4Q9UJQ4 1053 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 OGDHLQ9ULD0 1010 aa13.36□□□□□ -0.27
SYNGAP1-207ENST00000628646 MYH9P35579 1960 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 PDE2AO00408 941 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 IL18RAPO95256 599 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 NCKAP1LP55160 1127 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 IFRD2Q12894 506 aaPredicted RBP13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 SECISBP2LQ93073 1101 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 POP1Q99575 1024 aaKnown RBP13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 CDHR5Q9HBB8 845 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 TNFSF13BQ9Y275 285 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 ARHGEF37A1IGU5 675 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 H3BQF6 201 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 CYP27A1Q02318 531 aa13.35□□□□□ -0.27
SYNGAP1-207ENST00000628646 FRMD5Q7Z6J6 570 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms