RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 NOP58Q9Y2X3 529 aaKnown RBP4.47□□□□□ -1.69
VBP1-204ENST00000625964 MRFAP1Q9Y605 127 aa4.47□□□□□ -1.69
VBP1-204ENST00000625964 hCG_2014768A0A024R1R8 64 aa4.46□□□□□ -1.69
VBP1-204ENST00000625964 LOC105371045A0A1W2PR82 267 aa4.46□□□□□ -1.69
VBP1-204ENST00000625964 SHTN1A0MZ66 631 aa4.46□□□□□ -1.69
VBP1-204ENST00000625964 KCNAB3O43448 404 aa4.46□□□□□ -1.69
VBP1-204ENST00000625964 ZSCAN20P17040 1043 aaPredicted RBP4.46□□□□□ -1.69
VBP1-204ENST00000625964 DDX6P26196 483 aaKnown RBP eCLIP4.46□□□□□ -1.69
VBP1-204ENST00000625964 PLA2G5P39877 138 aa4.46□□□□□ -1.69
VBP1-204ENST00000625964 PNMA8AQ86V59 439 aaPredicted RBP4.46□□□□□ -1.69
VBP1-204ENST00000625964 PQLC1Q8N2U9 271 aa4.46□□□□□ -1.69
VBP1-204ENST00000625964 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.46□□□□□ -1.69
VBP1-204ENST00000625964 SSH1Q8WYL5 1049 aa4.46□□□□□ -1.69
VBP1-204ENST00000625964 FUBP3Q96I24 572 aaKnown RBP eCLIP4.46□□□□□ -1.69
VBP1-204ENST00000625964 BRINP2Q9C0B6 783 aa4.46□□□□□ -1.69
VBP1-204ENST00000625964 SPON1Q9HCB6 807 aa4.46□□□□□ -1.69
VBP1-204ENST00000625964 KIAA1586Q9HCI6 787 aa4.46□□□□□ -1.69
VBP1-204ENST00000625964 WASHC2CQ9Y4E1 1318 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 KLHL33A6NCF5 533 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 B5MCH6 92 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 NDUFS2O75306 463 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 ENDOD1O94919 500 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 RBP3P10745 1247 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 ANAPC15P60006 121 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 MXRA7P84157 204 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 MGAT2Q10469 447 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 PCBP2Q15366 365 aaKnown RBP eCLIP4.46□□□□□ -1.7
VBP1-204ENST00000625964 PTPN21Q16825 1174 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 MFSD14BQ5SR56 506 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 ANKS6Q68DC2 871 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 RNF169Q8NCN4 708 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 JADE3Q92613 823 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 DPF2Q92785 391 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 HOXB13Q92826 284 aaPredicted RBP4.46□□□□□ -1.7
VBP1-204ENST00000625964 ASPSCR1Q9BZE9 553 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 SENP6Q9GZR1 1112 aaPredicted RBP4.46□□□□□ -1.7
VBP1-204ENST00000625964 LDAHQ9H6V9 325 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 LANCL2Q9NS86 450 aa4.46□□□□□ -1.7
VBP1-204ENST00000625964 FAM171A2A8MVW0 826 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 PCDHGA12O60330 932 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 C5AR1P21730 350 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 SREBF1P36956 1147 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 FLT3LGP49771 235 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 RARRES1P49788 294 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 SEPT2Q15019 361 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 BRDTQ58F21 947 aaPredicted RBP4.45□□□□□ -1.7
VBP1-204ENST00000625964 DRICH1Q6PGQ1 229 aaPredicted RBP4.45□□□□□ -1.7
VBP1-204ENST00000625964 GPRIN1Q7Z2K8 1008 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 NRG4Q8WWG1 115 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 ZNF778Q96MU6 729 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 SAP30BPQ9UHR5 308 aaKnown RBP4.45□□□□□ -1.7
VBP1-204ENST00000625964 TUBD1Q9UJT1 453 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 INTUQ9ULD6 942 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 PCDHGA9Q9Y5G4 932 aaKnown RBP4.45□□□□□ -1.7
VBP1-204ENST00000625964 PCDHGA8Q9Y5G5 932 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 PCDHGA7Q9Y5G6 932 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 PCDHGA6Q9Y5G7 932 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 PCDHGA3Q9Y5H0 932 aa4.45□□□□□ -1.7
VBP1-204ENST00000625964 TNKSO95271 1327 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 FZD9O00144 591 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 RAP2AP10114 183 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 CCND1P24385 295 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 SLC16A1P53985 500 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 CACNA2D1P54289 1103 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 RNASE9P60153 205 aaKnown RBP4.44□□□□□ -1.7
VBP1-204ENST00000625964 RAP2BP61225 183 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 TP53BP2Q13625 1128 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 ZNF169Q14929 603 aaPredicted RBP4.44□□□□□ -1.7
VBP1-204ENST00000625964 KIAA1614Q5VZ46 1190 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 EFCAB12Q6NXP0 572 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 ZNF572Q7Z3I7 529 aaPredicted RBP4.44□□□□□ -1.7
VBP1-204ENST00000625964 OR10H5Q8NGA6 315 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 OR2I1PQ8NGU4 316 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.44□□□□□ -1.7
VBP1-204ENST00000625964 CCHCR1Q8TD31 782 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 STON2Q8WXE9 905 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 ASB10Q8WXI3 467 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 TFAP2CQ92754 450 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 TEKT5Q96M29 485 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 C7orf25Q9BPX7 421 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 TMEM140Q9NV12 185 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 MOCS1Q9NZB8 636 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 POGKQ9P215 609 aa4.44□□□□□ -1.7
VBP1-204ENST00000625964 AJAP1Q9UKB5 411 aaPredicted RBP4.44□□□□□ -1.7
VBP1-204ENST00000625964 UNC119BA6NIH7 251 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 TBKBP1A7MCY6 615 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 CXorf49A8MYA2 514 aaPredicted RBP4.43□□□□□ -1.7
VBP1-204ENST00000625964 LEFTY2O00292 366 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 IL2RBP14784 551 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 ALOX15P16050 662 aaPredicted RBP4.43□□□□□ -1.7
VBP1-204ENST00000625964 NCLP19338 710 aaKnown RBP4.43□□□□□ -1.7
VBP1-204ENST00000625964 SLC6A9P48067 706 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 KIF23Q02241 960 aaPredicted RBP4.43□□□□□ -1.7
VBP1-204ENST00000625964 NHLH2Q02577 135 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 SRSF4Q08170 494 aaKnown RBP4.43□□□□□ -1.7
VBP1-204ENST00000625964 SP140Q13342 867 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 FAM47AQ5JRC9 791 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 EFCAB2Q5VUJ9 269 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 AFMIDQ63HM1 303 aa4.43□□□□□ -1.7
VBP1-204ENST00000625964 MIGA2Q7L4E1 593 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms