RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 TRABDQ9H4I3 376 aa15□□□□□ -0.01
LDB3-209ENST00000623056 UBN1Q9NPG3 1134 aa15□□□□□ -0.01
LDB3-209ENST00000623056 R3HDM2Q9Y2K5 976 aaKnown RBP15□□□□□ -0.01
LDB3-209ENST00000623056 CYP26A1O43174 497 aa15□□□□□ -0.01
LDB3-209ENST00000623056 GCAP28676 217 aa15□□□□□ -0.01
LDB3-209ENST00000623056 SREBF1P36956 1147 aa15□□□□□ -0.01
LDB3-209ENST00000623056 GCLMP48507 274 aa15□□□□□ -0.01
LDB3-209ENST00000623056 CETN1Q12798 172 aa15□□□□□ -0.01
LDB3-209ENST00000623056 NR1H3Q13133 447 aa15□□□□□ -0.01
LDB3-209ENST00000623056 GRIPAP1Q4V328 841 aa15□□□□□ -0.01
LDB3-209ENST00000623056 SPDYAQ5MJ70 313 aa15□□□□□ -0.01
LDB3-209ENST00000623056 SLC30A10Q6XR72 485 aa15□□□□□ -0.01
LDB3-209ENST00000623056 RELL1Q8IUW5 271 aa15□□□□□ -0.01
LDB3-209ENST00000623056 SLC9A9Q8IVB4 645 aa15□□□□□ -0.01
LDB3-209ENST00000623056 SLF2Q8IX21 1173 aa15□□□□□ -0.01
LDB3-209ENST00000623056 FAM71AQ8IYT1 594 aa15□□□□□ -0.01
LDB3-209ENST00000623056 SYCP3Q8IZU3 236 aa15□□□□□ -0.01
LDB3-209ENST00000623056 ATL2Q8NHH9 583 aa15□□□□□ -0.01
LDB3-209ENST00000623056 IFT43Q96FT9 208 aa15□□□□□ -0.01
LDB3-209ENST00000623056 MIPEPQ99797 713 aa15□□□□□ -0.01
LDB3-209ENST00000623056 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15□□□□□ -0.01
LDB3-209ENST00000623056 SEL1LQ9UBV2 794 aa15□□□□□ -0.01
LDB3-209ENST00000623056 LNPEPQ9UIQ6 1025 aa15□□□□□ -0.01
LDB3-209ENST00000623056 ZFP69BQ9UJL9 534 aa15□□□□□ -0.01
LDB3-209ENST00000623056 LRCH1Q9Y2L9 728 aa15□□□□□ -0.01
LDB3-209ENST00000623056 NEU2Q9Y3R4 380 aa15□□□□□ -0.01
LDB3-209ENST00000623056 FOCADQ5VW36 1801 aa15□□□□□ -0.01
LDB3-209ENST00000623056 EXOC1LA0A1B0GW35 172 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 SLITRK3O94933 977 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 ABHD2P08910 425 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 SHMT1P34896 483 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 MAGEA4P43358 317 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 RASA3Q14644 834 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 ODR4Q5SWX8 454 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 TRAPPC3LQ5T215 181 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 IZUMO3Q5VZ72 239 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 PHC3Q8NDX5 983 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 MAIP1Q8WWC4 291 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 SLC5A5Q92911 643 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 DYDC2Q96IM9 177 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.99□□□□□ -0.01
LDB3-209ENST00000623056 SERPINB13Q9UIV8 391 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 DAGLAQ9Y4D2 1042 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 RPA3P35244 121 aaPredicted RBP14.99□□□□□ -0.01
LDB3-209ENST00000623056 SNAP25P60880 206 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 CDR2Q01850 454 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 GRAPQ13588 217 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 CCDC6Q16204 474 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 SLC45A4Q5BKX6 768 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 C15orf52Q6ZUT6 534 aaKnown RBP14.99□□□□□ -0.01
LDB3-209ENST00000623056 NLRP9Q7RTR0 991 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 OTOAQ7RTW8 1153 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 GRAPLQ8TC17 118 aaPredicted RBP14.99□□□□□ -0.01
LDB3-209ENST00000623056 KIFAP3Q92845 792 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 PCIF1Q9H4Z3 704 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 KIAA1586Q9HCI6 787 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 CYLDQ9NQC7 956 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 DDX4Q9NQI0 724 aaKnown RBP14.99□□□□□ -0.01
LDB3-209ENST00000623056 SCOCQ9UIL1 159 aa14.99□□□□□ -0.01
LDB3-209ENST00000623056 CIITAP33076 1130 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 VAMP7P51809 220 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 SLC18A1P54219 525 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 RCN2Q14257 317 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 RCN1Q15293 331 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 SLC1A5Q15758 541 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 PKN2Q16513 984 aaKnown RBP14.98□□□□□ -0.01
LDB3-209ENST00000623056 CTC1Q2NKJ3 1217 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 SNX30Q5VWJ9 437 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 DSTYKQ6XUX3 929 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 MTDHQ86UE4 582 aaKnown RBP14.98□□□□□ -0.01
LDB3-209ENST00000623056 C4orf33Q8N1A6 199 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 KCTD17Q8N5Z5 321 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 BBOF1Q8ND07 529 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 NRG4Q8WWG1 115 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 RBM15Q96T37 977 aaKnown RBP eCLIP14.98□□□□□ -0.01
LDB3-209ENST00000623056 CADM1Q9BY67 442 aaKnown RBP14.98□□□□□ -0.01
LDB3-209ENST00000623056 TUFT1Q9NNX1 390 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 SAR1AQ9NR31 198 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 SMG5Q9UPR3 1016 aaKnown RBP14.98□□□□□ -0.01
LDB3-209ENST00000623056 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.98□□□□□ -0.01
LDB3-209ENST00000623056 NUMBLQ9Y6R0 609 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 COL24A1Q17RW2 1714 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.98□□□□□ -0.01
LDB3-209ENST00000623056 RGL2O15211 777 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 CHMP2AO43633 222 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 FGFR1P11362 822 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 GPSM2P81274 684 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 SLC5A9Q2M3M2 681 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 C1orf220Q5T0J3 134 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 SYDE2Q5VT97 1194 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 FOXB2Q5VYV0 432 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 ZNF365Q70YC5 407 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 CLNKQ7Z7G1 428 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 CFAP61Q8NHU2 1237 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 SCG3Q8WXD2 468 aaKnown RBP14.98□□□□□ -0.01
LDB3-209ENST00000623056 KREMEN1Q96MU8 473 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 SMC6Q96SB8 1091 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 FAM118BQ9BPY3 351 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 TRIM4Q9C037 500 aa14.98□□□□□ -0.01
LDB3-209ENST00000623056 FAM196BA6NMK8 535 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms