RNA–Protein interactions for RNA: ENST00000622259.4

SNX12-206, Transcript of sorting nexin 12, humanhuman

TSL 5 BASIC

Gene SNX12, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-206ENST00000622259 ROR1Q01973 937 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 MBTD1Q05BQ5 628 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 RTN1Q16799 776 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 UAP1L1Q3KQV9 507 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 PDXDC1Q6P996 788 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 APOA5Q6Q788 366 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 CD300LGQ6UXG3 332 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 DDX27Q96GQ7 796 aaKnown RBP16.15■□□□□ 0.18
SNX12-206ENST00000622259 ZFYVE19Q96K21 471 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 LRRC3BQ96PB8 259 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 TMEM9BQ9NQ34 198 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 GTSE1Q9NYZ3 720 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 ANKFY1Q9P2R3 1169 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 BRPF3Q9ULD4 1205 aa16.15■□□□□ 0.18
SNX12-206ENST00000622259 KIF26AQ9ULI4 1882 aaPredicted RBP16.14■□□□□ 0.17
SNX12-206ENST00000622259 ESYT2A0FGR8 921 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 INO80B-WBP1J3KQ70 363 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 CHADO15335 359 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 AKAP3O75969 853 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 CHMLP26374 656 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 TKTP29401 623 aaKnown RBP16.14■□□□□ 0.17
SNX12-206ENST00000622259 CDC27P30260 824 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 PSMC5P62195 406 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 TEAD2Q15562 447 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 PFKFB3Q16875 520 aaPredicted RBP16.14■□□□□ 0.17
SNX12-206ENST00000622259 C1orf228Q6PIY5 440 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 RALGPS2Q86X27 583 aaPredicted RBP16.14■□□□□ 0.17
SNX12-206ENST00000622259 CEP170P1Q96L14 293 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 CACNA2D2Q9NY47 1150 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 BACE2Q9Y5Z0 518 aa16.14■□□□□ 0.17
SNX12-206ENST00000622259 APC2O95996 2303 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 ACACAQ13085 2346 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 SPAARA0A1B0GVQ0 90 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 EML1O00423 815 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 ABLIM3O94929 683 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 NUCB1Q02818 461 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 FCHO2Q0JRZ9 810 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 ELAVL2Q12926 359 aaKnown RBP16.13■□□□□ 0.17
SNX12-206ENST00000622259 HACE1Q8IYU2 909 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 SYNPOQ8N3V7 929 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 ZNF461Q8TAF7 563 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 CEP72Q9P209 647 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 ZMYM2Q9UBW7 1377 aa16.13■□□□□ 0.17
SNX12-206ENST00000622259 I3L4J1 428 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 SGSM2O43147 1006 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 EMC2Q15006 297 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 CYP4A22Q5TCH4 519 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 SLC27A1Q6PCB7 646 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 YAF2Q8IY57 180 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 CHCHD4Q8N4Q1 142 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 SHKBP1Q8TBC3 707 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 HHIPQ96QV1 700 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 CYP4F11Q9HBI6 524 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 C6orf50Q9HD87 102 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 XPNPEP1Q9NQW7 623 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 INSL5Q9Y5Q6 135 aa16.12■□□□□ 0.17
SNX12-206ENST00000622259 FAM221BA6H8Z2 402 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 PRRG1O14668 218 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 ASAP2O43150 1006 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 MYL4P12829 197 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 ELF1P32519 619 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 BRCC3P46736 316 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 IRX4P78413 519 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 TNK2Q07912 1038 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 SCAPQ12770 1279 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 PCBP1Q15365 356 aaKnown RBP eCLIP16.11■□□□□ 0.17
SNX12-206ENST00000622259 ELF2Q15723 593 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 SLC8B1Q6J4K2 584 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 IFNLR1Q8IU57 520 aaPredicted RBP16.11■□□□□ 0.17
SNX12-206ENST00000622259 FAM200AQ8TCP9 573 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 ASAP3Q8TDY4 903 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 HNRNPLLQ8WVV9 542 aaKnown RBP16.11■□□□□ 0.17
SNX12-206ENST00000622259 SLC8A2Q9UPR5 921 aa16.11■□□□□ 0.17
SNX12-206ENST00000622259 TENM4Q6N022 2769 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 A0A1B0GUA9 196 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 KHNYNO15037 678 aaKnown RBP16.1■□□□□ 0.17
SNX12-206ENST00000622259 ZBTB39O15060 712 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 MEFVO15553 781 aaPredicted RBP16.1■□□□□ 0.17
SNX12-206ENST00000622259 RHOBTB1O94844 696 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 SEC24BO95487 1268 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 TDP2O95551 362 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 IGHDP01880 384 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 PRB1P04280 392 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 PRKCBP05771 671 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 THP07101 528 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 ATF2P15336 505 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 RFC5P40937 340 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 ARPP19P56211 112 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 SIM1P81133 766 aaPredicted RBP16.1■□□□□ 0.17
SNX12-206ENST00000622259 NCBP1Q09161 790 aaKnown RBP16.1■□□□□ 0.17
SNX12-206ENST00000622259 CAPSQ13938 189 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 Q4G0T1 1027 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 STXBP5Q5T5C0 1151 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 SYNE3Q6ZMZ3 975 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 TCEAL8Q8IYN2 117 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 C3orf58Q8NDZ4 430 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 ETNPPLQ8TBG4 499 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 RUFY2Q8WXA3 655 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 TCEANC2Q96MN5 208 aa16.1■□□□□ 0.17
SNX12-206ENST00000622259 INVSQ9Y283 1065 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms