RNA–Protein interactions for RNA: ENST00000621474.4

CBWD3-217, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-217ENST00000621474 TSPAN18Q96SJ8 248 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 KIAA1586Q9HCI6 787 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 UBQLN1Q9UMX0 589 aaKnown RBP15.53■□□□□ 0.08
CBWD3-217ENST00000621474 STXBP5LQ9Y2K9 1186 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 DERAQ9Y315 318 aa15.53■□□□□ 0.08
CBWD3-217ENST00000621474 PODXLO00592 558 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 PPEF2O14830 753 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 KRT17Q04695 432 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 CYP24A1Q07973 514 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 MYBPC2Q14324 1141 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 TMEM132DQ14C87 1099 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 EDRF1Q3B7T1 1238 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 ADGRD2Q7Z7M1 963 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 VPS52Q8N1B4 723 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 EEF2KMTQ96G04 330 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 MFSD14AQ96MC6 490 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 UROC1Q96N76 676 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 TCF25Q9BQ70 676 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 COLEC11Q9BWP8 271 aa15.52■□□□□ 0.08
CBWD3-217ENST00000621474 TSC2P49815 1807 aa15.52■□□□□ 0.07
CBWD3-217ENST00000621474 CALUO43852 315 aaPredicted RBP15.51■□□□□ 0.07
CBWD3-217ENST00000621474 EXOC3O60645 756 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 AKAP3O75969 853 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 B3GAT3O94766 335 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 MBD3O95983 291 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 SOD2P04179 222 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 NR2F2P24468 414 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 PTPROQ16827 1216 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 LMBRD2Q68DH5 695 aaPredicted RBP15.51■□□□□ 0.07
CBWD3-217ENST00000621474 ANKRD40Q6AI12 368 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 DCLRE1AQ6PJP8 1040 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 NT5DC4Q86YG4 428 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 ZC3H3Q8IXZ2 948 aaKnown RBP15.51■□□□□ 0.07
CBWD3-217ENST00000621474 B3GALT6Q96L58 329 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 MED15Q96RN5 788 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 GTPBP4Q9BZE4 634 aaKnown RBP15.51■□□□□ 0.07
CBWD3-217ENST00000621474 TMEM63CQ9P1W3 806 aa15.51■□□□□ 0.07
CBWD3-217ENST00000621474 ANO9A1A5B4 782 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 HIDE1A8MVS5 230 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 CTSAP10619 480 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 RPL9P32969 192 aaKnown RBP15.5■□□□□ 0.07
CBWD3-217ENST00000621474 BRCC3P46736 316 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 PSMD6Q15008 389 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 C1orf127Q8N9H9 656 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 OR5B17Q8NGF7 314 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 AUTS2Q8WXX7 1259 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 DDX27Q96GQ7 796 aaKnown RBP15.5■□□□□ 0.07
CBWD3-217ENST00000621474 POP1Q99575 1024 aaKnown RBP15.5■□□□□ 0.07
CBWD3-217ENST00000621474 MTMR12Q9C0I1 747 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 CHST7Q9NS84 486 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 PUF60Q9UHX1 559 aaKnown RBP15.5■□□□□ 0.07
CBWD3-217ENST00000621474 PIRO00625 290 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 LILRB3O75022 631 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 CCNE1P24864 410 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 AARSP49588 968 aaKnown RBP eCLIP15.5■□□□□ 0.07
CBWD3-217ENST00000621474 ADAM9Q13443 819 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 TCEAL5Q5H9L2 206 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 PLPP4Q5VZY2 271 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 C9orf57Q5W0N0 161 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 TTI2Q6NXR4 508 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 PARD3BQ8TEW8 1205 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 ZNF516Q92618 1163 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 DHTKD1Q96HY7 919 aaPredicted RBP15.5■□□□□ 0.07
CBWD3-217ENST00000621474 DUSP9Q99956 384 aaKnown RBP15.5■□□□□ 0.07
CBWD3-217ENST00000621474 HERC2P3Q9BVR0 1158 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 INTS13Q9NVM9 706 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 IRAK3Q9Y616 596 aa15.5■□□□□ 0.07
CBWD3-217ENST00000621474 SF3B1O75533 1304 aaKnown RBP eCLIP15.49■□□□□ 0.07
CBWD3-217ENST00000621474 C5orf42Q9H799 3197 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 PLXNA3P51805 1871 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 C2orf71A6NGG8 1288 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 I3L4J1 428 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 PSMA7O14818 248 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 SPTLC1O15269 473 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 XPOTO43592 962 aaKnown RBP15.49■□□□□ 0.07
CBWD3-217ENST00000621474 TADA2AO75478 443 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 GTF2F1P35269 517 aaKnown RBP eCLIP15.49■□□□□ 0.07
CBWD3-217ENST00000621474 MCCD1P59942 119 aaPredicted RBP15.49■□□□□ 0.07
CBWD3-217ENST00000621474 DLG4P78352 724 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 CLDN10P78369 228 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 TFAMQ00059 246 aaKnown RBP15.49■□□□□ 0.07
CBWD3-217ENST00000621474 LRRC63Q05C16 580 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 PTPN14Q15678 1187 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 CCDC85BQ15834 202 aaPredicted RBP15.49■□□□□ 0.07
CBWD3-217ENST00000621474 DPCR1Q3MIW9 517 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 TIGD5Q53EQ6 642 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 RTP2Q5QGT7 225 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 C1orf220Q5T0J3 134 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 KIAA0319Q5VV43 1072 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 CEP135Q66GS9 1140 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 KLHL10Q6JEL2 608 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 TMC7Q7Z402 723 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 MICALL1Q8N3F8 863 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 BEST2Q8NFU1 509 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 CCDC127Q96BQ5 260 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 BORCS6Q96GS4 357 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 NSUN3Q9H649 340 aaKnown RBP15.49■□□□□ 0.07
CBWD3-217ENST00000621474 NGRNQ9NPE2 291 aaKnown RBP15.49■□□□□ 0.07
CBWD3-217ENST00000621474 ENTPD7Q9NQZ7 604 aa15.49■□□□□ 0.07
CBWD3-217ENST00000621474 DPP3Q9NY33 737 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms