RNA–Protein interactions for RNA: ENST00000614398.4

CBWD3-210, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,563 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-210ENST00000614398 RPL9P32969 192 aaKnown RBP6.74□□□□□ -1.33
CBWD3-210ENST00000614398 DLG4P78352 724 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 UBXN1Q04323 297 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 KCNMA1Q12791 1236 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 NFX1Q12986 1120 aaKnown RBP6.74□□□□□ -1.33
CBWD3-210ENST00000614398 IKBKEQ14164 716 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 TCTN1Q2MV58 587 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 CBWD6Q4V339 395 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 CBWD3Q5JTY5 395 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 CBWD5Q5RIA9 395 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 COL13A1Q5TAT6 717 aaPredicted RBP6.74□□□□□ -1.33
CBWD3-210ENST00000614398 RASIP1Q5U651 963 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 TDRD10Q5VZ19 366 aaKnown RBP6.74□□□□□ -1.33
CBWD3-210ENST00000614398 SV2AQ7L0J3 742 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 ZNF771Q7L3S4 317 aaPredicted RBP6.74□□□□□ -1.33
CBWD3-210ENST00000614398 TMEM192Q8IY95 271 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 TTC39CQ8N584 583 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 FBXL13Q8NEE6 735 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 BEST2Q8NFU1 509 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 SYN2Q92777 582 aaPredicted RBP6.74□□□□□ -1.33
CBWD3-210ENST00000614398 DDX27Q96GQ7 796 aaKnown RBP6.74□□□□□ -1.33
CBWD3-210ENST00000614398 NAA15Q9BXJ9 866 aaKnown RBP6.74□□□□□ -1.33
CBWD3-210ENST00000614398 MRPL9Q9BYD2 267 aaKnown RBP6.74□□□□□ -1.33
CBWD3-210ENST00000614398 VPS16Q9H269 839 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 RSAD1Q9HA92 442 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 RC3H2Q9HBD1 1191 aaKnown RBP6.74□□□□□ -1.33
CBWD3-210ENST00000614398 PDE11AQ9HCR9 933 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 PTPRJQ12913 1337 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 TRIP11Q15643 1979 aa6.74□□□□□ -1.33
CBWD3-210ENST00000614398 SMIM28A0A1B0GU29 152 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 PTGESO14684 152 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 TEX33O43247 280 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 CLSTN1O94985 981 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 VNN1O95497 513 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 ASS1P00966 412 aaKnown RBP6.73□□□□□ -1.33
CBWD3-210ENST00000614398 PON1P27169 355 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 HNRNPH3P31942 346 aaKnown RBP6.73□□□□□ -1.33
CBWD3-210ENST00000614398 PNPLA4P41247 253 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 GCNT1Q02742 428 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 FPGSQ05932 587 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 DSC1Q08554 894 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 EXOC3L4Q17RC7 722 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 DCAF17Q5H9S7 520 aaPredicted RBP6.73□□□□□ -1.33
CBWD3-210ENST00000614398 JADE1Q6IE81 842 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 TRAPPC11Q7Z392 1133 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 DRC7Q8IY82 874 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 UBR7Q8N806 425 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 GSTCDQ8NEC7 633 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 HERVK_113Q902F9 699 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 TMEM175Q9BSA9 504 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 PPP1R12CQ9BZL4 782 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 INTS2Q9H0H0 1204 aaKnown RBP6.73□□□□□ -1.33
CBWD3-210ENST00000614398 NUCKS1Q9H1E3 243 aaKnown RBP6.73□□□□□ -1.33
CBWD3-210ENST00000614398 CEP72Q9P209 647 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 PIRO00625 290 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 NFICP08651 508 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 TMEM191BP0C7N4 346 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 HARSP12081 509 aaKnown RBP6.73□□□□□ -1.33
CBWD3-210ENST00000614398 ITGB8P26012 769 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 AARSP49588 968 aaKnown RBP eCLIP6.73□□□□□ -1.33
CBWD3-210ENST00000614398 GSDMDP57764 484 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 RBP5P82980 135 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 SYCP1Q15431 976 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 KLHDC7AQ5VTJ3 777 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 TRIM65Q6PJ69 517 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 CDR2LQ86X02 465 aaPredicted RBP6.73□□□□□ -1.33
CBWD3-210ENST00000614398 PDCL2Q8N4E4 241 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 C1orf127Q8N9H9 656 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 OR5B17Q8NGF7 314 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 PHOSPHO2Q8TCD6 241 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 SCLYQ96I15 445 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 ZNF560Q96MR9 790 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 ZMAT2Q96NC0 199 aaKnown RBP6.73□□□□□ -1.33
CBWD3-210ENST00000614398 RAB20Q9NX57 234 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.73□□□□□ -1.33
CBWD3-210ENST00000614398 GCNT4Q9P109 453 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 PRKAG2Q9UGJ0 569 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 SIX4Q9UIU6 781 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 CAPN11Q9UMQ6 739 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 CNTN6Q9UQ52 1028 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 KIAA1671Q9BY89 1806 aa6.73□□□□□ -1.33
CBWD3-210ENST00000614398 ARL5CA6NH57 179 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 NOL4O94818 638 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 HLA-DRAP01903 254 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 AMHP03971 560 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 TNNI1P19237 187 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 TBXAS1P24557 533 aaPredicted RBP6.72□□□□□ -1.33
CBWD3-210ENST00000614398 ANXA13P27216 316 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 GCLMP48507 274 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 RGS19P49795 217 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 CCL23P55773 120 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 JAM2P57087 298 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 CDK17Q00537 523 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 TUSC3Q13454 348 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 SGSM1Q2NKQ1 1148 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 CLLU1OSQ5K130 101 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 TCERG1LQ5VWI1 586 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 GLB1LQ6UWU2 654 aa6.72□□□□□ -1.33
CBWD3-210ENST00000614398 CMTR2Q8IYT2 770 aaKnown RBP6.72□□□□□ -1.33
CBWD3-210ENST00000614398 RDH13Q8NBN7 331 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms