RNA–Protein interactions for RNA: ENST00000614377.1

CBWD3-209, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,994 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-209ENST00000614377 FETUBQ9UGM5 382 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 SEPT3Q9UH03 358 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 GPR52Q9Y2T5 361 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 CAPN7Q9Y6W3 813 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 IFT140Q96RY7 1462 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 TTC21AQ8NDW8 1320 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 A0A1B0GWJ7 208 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 FAM47E-STBD1D6RA91 191 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 M0R2N6 131 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 PMM2O15305 246 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 FOXP2O15409 715 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 NDUFA2O43678 99 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 CLN5O75503 358 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 LUC7L3O95232 432 aaKnown RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 OXSR1O95747 527 aaPredicted RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 DNTTP04053 509 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 FBXO45P0C2W1 286 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 CHRNB1P11230 501 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 SYN1P17600 705 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 HDCP19113 662 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 DNAJB1P25685 340 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 HNF4AP41235 474 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 SOX9P48436 509 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 ATP1A2P50993 1020 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 PLCD1P51178 756 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 PCBP4P57723 403 aaKnown RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 SSTP61278 116 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 BTKQ06187 659 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 CETN1Q12798 172 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 SMARCB1Q12824 385 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 PDE3AQ14432 1141 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 ZNF124Q15973 351 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 ADRM1Q16186 407 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 WHAMMP3Q1A5X7 153 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 CYP27C1Q4G0S4 372 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 PDCD4Q53EL6 469 aaKnown RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 XRRA1Q6P2D8 792 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 DRICH1Q6PGQ1 229 aaPredicted RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 MFSD6Q6ZSS7 791 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 GALNTL5Q7Z4T8 443 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 DENND6BQ8NEG7 585 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 LINS1Q8NG48 757 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 WDR60Q8WVS4 1066 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 RUBCNQ92622 972 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 JAKMIP1Q96N16 626 aaKnown RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 TTC25Q96NG3 672 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 HAPLN3Q96S86 360 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 FAM129BQ96TA1 746 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 SMAD5Q99717 465 aaKnown RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 GAL3ST1Q99999 423 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 ESYT1Q9BSJ8 1104 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 EDEM3Q9BZQ6 932 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 VPS16Q9H269 839 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 FANCEQ9HB96 536 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 ABCB6Q9NP58 842 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 HPS4Q9NQG7 708 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 SLTMQ9NWH9 1034 aaKnown RBP eCLIP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 RRN3Q9NYV6 651 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 FNIP2Q9P278 1114 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 MBD2Q9UBB5 411 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 DPP7Q9UHL4 492 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 RASAL2Q9UJF2 1139 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 VANGL2Q9ULK5 521 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 C19orf53Q9UNZ5 99 aaPredicted RBP3.24□□□□□ -1.89
CBWD3-209ENST00000614377 DNAJC16Q9Y2G8 782 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 ATP6V1DQ9Y5K8 247 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 PTCH2Q9Y6C5 1203 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 MAP3K1Q13233 1512 aa3.24□□□□□ -1.89
CBWD3-209ENST00000614377 MROH5Q6ZUA9 1318 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 ZMYM4Q5VZL5 1548 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 A0A0B4J269 797 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 A0A0G2JPF8 293 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 A0A0J9YVX5 310 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 FAM237AA0A1B0GTK4 181 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP3.23□□□□□ -1.89
CBWD3-209ENST00000614377 HNRNPCL3B7ZW38 293 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 UBXN8O00124 270 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 MAPK13O15264 365 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 SRGAP3O43295 1099 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 CTNND1O60716 968 aaKnown RBP3.23□□□□□ -1.89
CBWD3-209ENST00000614377 LARGE1O95461 756 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 IGHA2P01877 340 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 APOA4P06727 396 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 HNRNPCL4P0DMR1 293 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 DLATP10515 647 aaKnown RBP3.23□□□□□ -1.89
CBWD3-209ENST00000614377 SELLP14151 372 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 CPA3P15088 417 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 CD33P20138 364 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 SFPQP23246 707 aaKnown RBP eCLIP3.23□□□□□ -1.89
CBWD3-209ENST00000614377 ADH6P28332 368 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 TRIM23P36406 574 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 IFNAR2P48551 515 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 HADHBP55084 474 aaKnown RBP3.23□□□□□ -1.89
CBWD3-209ENST00000614377 RPP38P78345 283 aaKnown RBP3.23□□□□□ -1.89
CBWD3-209ENST00000614377 KDSRQ06136 332 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 CDC16Q13042 620 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 NR1H3Q13133 447 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 SGCGQ13326 291 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 AP3B2Q13367 1082 aa3.23□□□□□ -1.89
CBWD3-209ENST00000614377 SMAD4Q13485 552 aaKnown RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms