RNA–Protein interactions for RNA: ENST00000612455.1

CCND3-222, Transcript of cyclin D3, human

Gene CCND3, Length 536 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCND3-222	ENST00000612455	LILRA6	Q6PI73	481 aa		18.19	■□□□□ 0.5
CCND3-222	ENST00000612455	CRELD2	Q6UXH1	353 aa	Predicted RBP	18.19	■□□□□ 0.5
CCND3-222	ENST00000612455	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	18.19	■□□□□ 0.5
CCND3-222	ENST00000612455	UNC13D	Q70J99	1090 aa		18.19	■□□□□ 0.5
CCND3-222	ENST00000612455	EPM2AIP1	Q7L775	607 aa	Predicted RBP	18.19	■□□□□ 0.5
CCND3-222	ENST00000612455	FBXL18	Q96ME1	805 aa		18.19	■□□□□ 0.5
CCND3-222	ENST00000612455	ADAM7	Q9H2U9	754 aa		18.19	■□□□□ 0.5
CCND3-222	ENST00000612455	USP25	Q9UHP3	1055 aa		18.19	■□□□□ 0.5
CCND3-222	ENST00000612455	SERTAD1	Q9UHV2	236 aa		18.19	■□□□□ 0.5
CCND3-222	ENST00000612455	AGO2	Q9UKV8	859 aa	Known RBP	18.19	■□□□□ 0.5
CCND3-222	ENST00000612455		A0A1B0GVL5	298 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455		A0A1W2PQ27	194 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455		A0A1W2PQ64	194 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455		A0A1W2PQD8	194 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	TRAPPC3	O43617	180 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	PRPF6	O94906	941 aa	Known RBP	18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	PFKFB1	P16118	471 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	GART	P22102	1010 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	ASIC1	P78348	528 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	CREM	Q03060	361 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	PRSS55	Q6UWB4	352 aa	Predicted RBP	18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	GJD3	Q8N144	294 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	GLIS3	Q8NEA6	775 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	ZNF507	Q8TCN5	953 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	HDAC7	Q8WUI4	952 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	CLSTN3	Q9BQT9	956 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	ASB7	Q9H672	318 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	TMEM206	Q9H813	350 aa		18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	UBQLN1	Q9UMX0	589 aa	Known RBP	18.18	■□□□□ 0.5
CCND3-222	ENST00000612455	EIF3D	O15371	548 aa	Known RBP eCLIP	18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	CASP1	P29466	404 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	HOXD13	P35453	343 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	BRCC3	P46736	316 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	ACOT2	P49753	483 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	PPP2R3A	Q06190	1150 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	CUL4B	Q13620	913 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	SPATA1	Q5VX52	437 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	PDXDC1	Q6P996	788 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	C12orf76	Q8N812	135 aa	Predicted RBP	18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	POMGNT1	Q8WZA1	660 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	HPS3	Q969F9	1004 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	KIF12	Q96FN5	646 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	PAGE5	Q96GU1	130 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	PHF7	Q9BWX1	381 aa	Predicted RBP	18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	DERA	Q9Y315	318 aa		18.17	■□□□□ 0.5
CCND3-222	ENST00000612455	LOC730098	B7Z3J9	87 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	KLRC4	O43908	158 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	LDHA	P00338	332 aa	Known RBP	18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	RPL17	P18621	184 aa	Known RBP	18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	AFM	P43652	599 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	SPAG1	Q07617	926 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	MRPL58	Q14197	206 aa	Known RBP	18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	CBX2	Q14781	532 aa	Predicted RBP	18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	FAM26F	Q5R3K3	315 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	KANK3	Q6NY19	840 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	STXBP4	Q6ZWJ1	553 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	CEP57	Q86XR8	500 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	CEP57L1	Q8IYX8	460 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	CMAS	Q8NFW8	434 aa	Predicted RBP	18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	APOL5	Q9BWW9	433 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	RHOBTB2	Q9BYZ6	727 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	BLZF1	Q9H2G9	400 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	PLEKHA4	Q9H4M7	779 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	TUBGCP4	Q9UGJ1	667 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	DPP7	Q9UHL4	492 aa		18.16	■□□□□ 0.5
CCND3-222	ENST00000612455	TGM5	O43548	720 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	XPOT	O43592	962 aa	Known RBP	18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	TBC1D4	O60343	1298 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	GLUD1	P00367	558 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	TKT	P29401	623 aa	Known RBP	18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	NDUFA8	P51970	172 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	PSMD5	Q16401	504 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	RARS2	Q5T160	578 aa	Known RBP	18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	JADE1	Q6IE81	842 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	CES5A	Q6NT32	575 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	GRAMD1C	Q8IYS0	662 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	SYCP3	Q8IZU3	236 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	TMEM130	Q8N3G9	435 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	ZSWIM2	Q8NEG5	633 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	SUSD3	Q96L08	255 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	POP1	Q99575	1024 aa	Known RBP	18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	SFXN1	Q9H9B4	322 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	MTRR	Q9UBK8	725 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	C2CD2	Q9Y426	696 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455	BACE2	Q9Y5Z0	518 aa		18.15	■□□□□ 0.5
CCND3-222	ENST00000612455		I3L4J1	428 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	SYN3	O14994	580 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	MYL1	P05976	194 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	MTHFR	P42898	656 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	SYK	P43405	635 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	AARS	P49588	968 aa	Known RBP eCLIP	18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	RAB33A	Q14088	237 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	CYP26C1	Q6V0L0	522 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	ANKS3	Q6ZW76	656 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	GPR149	Q86SP6	731 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	PALB2	Q86YC2	1186 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	FEZF2	Q8TBJ5	459 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	KHSRP	Q92945	711 aa	Known RBP eCLIP	18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	NECTIN4	Q96NY8	510 aa		18.14	■□□□□ 0.49
CCND3-222	ENST00000612455	CBWD1	Q9BRT8	395 aa		18.14	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms