RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 BEST2Q8NFU1 509 aa16.25■□□□□ 0.19
CSNK2A1-209ENST00000609606 NOC3LQ8WTT2 800 aaKnown RBP16.25■□□□□ 0.19
CSNK2A1-209ENST00000609606 MFSD14AQ96MC6 490 aa16.25■□□□□ 0.19
CSNK2A1-209ENST00000609606 VN1R3Q9BXE9 311 aa16.25■□□□□ 0.19
CSNK2A1-209ENST00000609606 GOLGA2P5Q9HBQ8 144 aa16.25■□□□□ 0.19
CSNK2A1-209ENST00000609606 NGRNQ9NPE2 291 aaKnown RBP16.25■□□□□ 0.19
CSNK2A1-209ENST00000609606 CACNG4Q9UBN1 327 aa16.25■□□□□ 0.19
CSNK2A1-209ENST00000609606 TUBGCP4Q9UGJ1 667 aa16.25■□□□□ 0.19
CSNK2A1-209ENST00000609606 SCN1AP35498 2009 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 SF3B1O75533 1304 aaKnown RBP eCLIP16.24■□□□□ 0.192e-14■■■■■ 55.4
CSNK2A1-209ENST00000609606 PPP1R3GB7ZBB8 358 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 PODXLO00592 558 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 B3GAT3O94766 335 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 KIF4AO95239 1232 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 CD44P16070 742 aaKnown RBP16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 NR2F2P24468 414 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 CCNE1P24864 410 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 WNT7BP56706 349 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 ELAVL2Q12926 359 aaKnown RBP16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 BMS1Q14692 1282 aaKnown RBP16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 PSMD6Q15008 389 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 FUT10Q6P4F1 479 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 ZC3H3Q8IXZ2 948 aaKnown RBP16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 GPR65Q8IYL9 337 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 VPS52Q8N1B4 723 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 CACTINQ8WUQ7 758 aaKnown RBP16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 TSG101Q99816 390 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 ZBP1Q9H171 429 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 PDE11AQ9HCR9 933 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 FRMD4BQ9Y2L6 1034 aa16.24■□□□□ 0.19
CSNK2A1-209ENST00000609606 VWA8A3KMH1 1905 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 REV3LO60673 3130 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 ANO9A1A5B4 782 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 F8W810 466 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 TADA2AO75478 443 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 SOD2P04179 222 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 CTSAP10619 480 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 PAX3P23760 479 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 ERVFC1P60507 584 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 ENPEPQ07075 957 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 CD300LGQ6UXG3 332 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 WDR49Q8IV35 697 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 MLKLQ8NB16 471 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 RDH13Q8NBN7 331 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 RABGGTAQ92696 567 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 TCF25Q9BQ70 676 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 MKNK1Q9BUB5 465 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 HERC2P3Q9BVR0 1158 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 NSUN3Q9H649 340 aaKnown RBP16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 IRAK3Q9Y616 596 aa16.23■□□□□ 0.19
CSNK2A1-209ENST00000609606 BICDL2A1A5D9 508 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 TRAPPC3O43617 180 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 IRS1P35568 1242 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 CASP4P49662 377 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 PMS1P54277 932 aaKnown RBP16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 MCCD1P59942 119 aaPredicted RBP16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 CLDN10P78369 228 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 TFAMQ00059 246 aaKnown RBP16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 FKBP3Q00688 224 aaKnown RBP16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 ADAM9Q13443 819 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 SMC1AQ14683 1233 aaKnown RBP16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 CCDC183Q5T5S1 534 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 CEP135Q66GS9 1140 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 ANKRD40Q6AI12 368 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 MRPL43Q8N983 215 aaKnown RBP16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 C3orf58Q8NDZ4 430 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 PPP2R3CQ969Q6 453 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 FNBP1Q96RU3 617 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 CGRRF1Q99675 332 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 GPR62Q9BZJ7 368 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 ENTPD7Q9NQZ7 604 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 CHST7Q9NS84 486 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 INTS13Q9NVM9 706 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 DPP3Q9NY33 737 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 SSX2IPQ9Y2D8 614 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 SSUH2Q9Y2M2 353 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 BRWD1Q9NSI6 2320 aa16.22■□□□□ 0.19
CSNK2A1-209ENST00000609606 PIRO00625 290 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 CETN3O15182 167 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 AKAP3O75969 853 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 PSMC2P35998 433 aaKnown RBP16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 AARSP49588 968 aaKnown RBP eCLIP16.21■□□□□ 0.198e-6■■■■■ 52.4
CSNK2A1-209ENST00000609606 DSG1Q02413 1049 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 PAK1Q13153 545 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 DUOXA2Q1HG44 320 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 USP41Q3LFD5 358 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 C9orf57Q5W0N0 161 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 TTI2Q6NXR4 508 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 TMC7Q7Z402 723 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 USP37Q86T82 979 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 TMC2Q8TDI7 906 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 MICAL1Q8TDZ2 1067 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 PARD3BQ8TEW8 1205 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 HASPINQ8TF76 798 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 NELFBQ8WX92 580 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 CCDC127Q96BQ5 260 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 GZF1Q9H116 711 aaPredicted RBP16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 ITGA11Q9UKX5 1188 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 COL6A3P12111 3177 aa16.21■□□□□ 0.19
CSNK2A1-209ENST00000609606 PTPRJQ12913 1337 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms