RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SOX4Q06945 474 aaPredicted RBP16.27■□□□□ 0.2
CTSA-216ENST00000607212 RAD51AP2Q09MP3 1159 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 CTXN3Q4LDR2 81 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 ZBTB41Q5SVQ8 909 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 MCTP1Q6DN14 999 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 PDZD4Q76G19 769 aaPredicted RBP16.27■□□□□ 0.2
CTSA-216ENST00000607212 RTL10Q7L3V2 364 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 TMEM134Q9H6X4 195 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 LTB4R2Q9NPC1 389 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 NCDNQ9UBB6 729 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 MTF2Q9Y483 593 aaPredicted RBP16.27■□□□□ 0.2
CTSA-216ENST00000607212 NOTCH4Q99466 2003 aa16.27■□□□□ 0.2
CTSA-216ENST00000607212 CACNA1IQ9P0X4 2223 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 MCF2P10911 925 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 PDIA5Q14554 519 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 SLC5A9Q2M3M2 681 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 CYP4A22Q5TCH4 519 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 IQCEQ6IPM2 695 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 ZNF280DQ6N043 979 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 MPZL3Q6UWV2 235 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 DTHD1Q6ZMT9 781 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 ZNF461Q8TAF7 563 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 ATRIPQ8WXE1 791 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 BICD1Q96G01 975 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 CDK5RAP3Q96JB5 506 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 RUSC1Q9BVN2 902 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 BRD9Q9H8M2 597 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 SH2B1Q9NRF2 756 aaPredicted RBP16.26■□□□□ 0.19
CTSA-216ENST00000607212 GDE1Q9NZC3 331 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 MRPS17Q9Y2R5 130 aaKnown RBP16.26■□□□□ 0.19
CTSA-216ENST00000607212 RBM19Q9Y4C8 960 aaKnown RBP16.26■□□□□ 0.19
CTSA-216ENST00000607212 PCDHB6Q9Y5E3 794 aa16.26■□□□□ 0.19
CTSA-216ENST00000607212 FANCMQ8IYD8 2048 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 WDR27A2RRH5 827 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 SFI1A8K8P3 1242 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 ZNF197O14709 1029 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 SYN3O14994 580 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 ECI2O75521 394 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 SEC24BO95487 1268 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 CPB1P15086 417 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 CDC25AP30304 524 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 SMTNP53814 917 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 GRM2Q14416 872 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 CD300LGQ6UXG3 332 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 ZNF852Q6ZMS4 543 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 APPL2Q8NEU8 664 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 RUBCNQ92622 972 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 C18orf25Q96B23 403 aaPredicted RBP16.25■□□□□ 0.19
CTSA-216ENST00000607212 ZNF512Q96ME7 567 aaPredicted RBP16.25■□□□□ 0.19
CTSA-216ENST00000607212 ZMAT2Q96NC0 199 aaKnown RBP16.25■□□□□ 0.19
CTSA-216ENST00000607212 PLIN2Q99541 437 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 ZFP14Q9HCL3 533 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 HEBP1Q9NRV9 189 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 NDRG2Q9UN36 371 aaKnown RBP16.25■□□□□ 0.19
CTSA-216ENST00000607212 CFAP54Q96N23 3096 aa16.25■□□□□ 0.19
CTSA-216ENST00000607212 PATJQ8NI35 1801 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 SPTBN4Q9H254 2564 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 MYL4P12829 197 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 RPL9P32969 192 aaKnown RBP16.24■□□□□ 0.19
CTSA-216ENST00000607212 MAGEA9P43362 315 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 ADCY1Q08828 1119 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 NOLC1Q14978 699 aaKnown RBP eCLIP16.24■□□□□ 0.199e-12■■□□□ 12.5
CTSA-216ENST00000607212 SEZ6Q53EL9 994 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 TANGO2Q6ICL3 276 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 SLC8B1Q6J4K2 584 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 RINT1Q6NUQ1 792 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 DGLUCYQ7Z3D6 616 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 DCLK2Q8N568 766 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 C4orf32Q8N8J7 132 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 SECISBP2LQ93073 1101 aaKnown RBP16.24■□□□□ 0.19
CTSA-216ENST00000607212 ZBTB45Q96K62 511 aaPredicted RBP16.24■□□□□ 0.19
CTSA-216ENST00000607212 PLA2G2FQ9BZM2 168 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 SLITRK6Q9H5Y7 841 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 FBXL5Q9UKA1 691 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 INSL5Q9Y5Q6 135 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 GTF3C3Q9Y5Q9 886 aa16.24■□□□□ 0.19
CTSA-216ENST00000607212 PDCD11Q14690 1871 aaKnown RBP16.23■□□□□ 0.19
CTSA-216ENST00000607212 ARHGEF37A1IGU5 675 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 LAD1O00515 517 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 ATF2P15336 505 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 KCNE1P15382 129 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 TARSP26639 723 aaKnown RBP16.23■□□□□ 0.19
CTSA-216ENST00000607212 TWF1Q12792 350 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 ALKAL1Q6UXT8 129 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 TAS1R3Q7RTX0 852 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 DAW1Q8N136 415 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 IGSF22Q8N9C0 903 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 ELSPBP1Q96BH3 223 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 RMDN1Q96DB5 314 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 TCEAL4Q96EI5 215 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 TBC1D32Q96NH3 1257 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 NELL2Q99435 816 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 DDX23Q9BUQ8 820 aaKnown RBP16.23■□□□□ 0.19
CTSA-216ENST00000607212 OSBPL6Q9BZF3 934 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 C17orf75Q9HAS0 396 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 PTPRHQ9HD43 1115 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 ASAH2Q9NR71 780 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 CNTN3Q9P232 1028 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 ARHGAP28Q9P2N2 729 aa16.23■□□□□ 0.19
CTSA-216ENST00000607212 KCNG1Q9UIX4 513 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms