RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 PCDHB2Q9Y5E7 798 aa13.21□□□□□ -0.29
NEDD8-MDP1-203ENST00000604306 SCN1AP35498 2009 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 LACTBL1A8MY62 500 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 GPR182O15218 404 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 P4HA1P13674 534 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CAPN2P17655 700 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PDE6CP51160 858 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CHMP4BP1P59074 171 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 GNG11P61952 73 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ZNF200P98182 395 aaPredicted RBP13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CYP27A1Q02318 531 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ARID5AQ03989 594 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TRPC3Q13507 836 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TCEAL1Q15170 157 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ALKBH5Q6P6C2 394 aaKnown RBP13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ALKAL1Q6UXT8 129 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 SYT10Q6XYQ8 523 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 HACE1Q8IYU2 909 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 UBR7Q8N806 425 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CEP120Q8N960 986 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 OLIG1Q8TAK6 271 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 SECISBP2LQ93073 1101 aaKnown RBP13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 SNX27Q96L92 541 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ALS2CR12Q96Q35 445 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 AGPAT1Q99943 283 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 NOCTQ9UK39 431 aaKnown RBP13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CDY2AQ9Y6F7 541 aa13.2□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 NCANO14594 1321 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 GRIN2DO15399 1336 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 A0A0U1RQG5 324 aaPredicted RBP13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 DDX3XO00571 662 aaKnown RBP eCLIP13.19□□□□□ -0.32e-10■■□□□ 13.8
NEDD8-MDP1-203ENST00000604306 LRRN2O75325 713 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 NPTXRO95502 500 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 KCNE1P15382 129 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CYP3A5P20815 502 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CASQ1P31415 396 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 RAB27AP51159 221 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TFAMQ00059 246 aaKnown RBP13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CDR2Q01850 454 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PTGISQ16647 500 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ZNF699Q32M78 642 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 SEZ6Q53EL9 994 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 FAM47CQ5HY64 1035 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TRIM72Q6ZMU5 477 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 FAM228AQ86W67 206 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CXorf38Q8TB03 319 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TMEM40Q8WWA1 233 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TATDN2Q93075 761 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PPP1R16BQ96T49 567 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 BCO2Q9BYV7 579 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TRIM6Q9C030 488 aaPredicted RBP13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 LACRTQ9GZZ8 138 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 XYLT2Q9H1B5 865 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CYP3A43Q9HB55 503 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CDHR5Q9HBB8 845 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PAK6Q9NQU5 681 aaPredicted RBP13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 DNAI1Q9UI46 699 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PIN4Q9Y237 131 aaKnown RBP13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PTPN22Q9Y2R2 807 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TRIM17Q9Y577 477 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 PTCH2Q9Y6C5 1203 aa13.19□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CTAGE9A4FU28 777 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 KBTBD13C9JR72 458 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 DNM1LO00429 736 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 MEFVO15553 781 aaPredicted RBP13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TACC1O75410 805 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CSDE1O75534 798 aaKnown RBP13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 RPS6KA5O75582 802 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CAPN15O75808 1086 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 NFICP08651 508 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 H2AFZP0C0S5 128 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TMEM253P0C7T8 217 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 SKIP12755 728 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 CYP11B1P15538 503 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ACO1P21399 889 aaKnown RBP13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TNFAIP3P21580 790 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 GTF2F1P35269 517 aaKnown RBP eCLIP13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ZNF132P52740 706 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 HADHBP55084 474 aaKnown RBP13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 RBP5P82980 135 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TMEM62Q0P6H9 643 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ZBTB6Q15916 424 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TRIM71Q2Q1W2 868 aaKnown RBP13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 UBXN11Q5T124 520 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 LMBRD2Q68DH5 695 aaPredicted RBP13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 JADE1Q6IE81 842 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 H2AFVQ71UI9 128 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 LRRC52Q8N7C0 313 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 C1orf127Q8N9H9 656 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 LNX1Q8TBB1 728 aaPredicted RBP13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 NOX5Q96PH1 765 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 NAPGQ99747 312 aaPredicted RBP13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 ISCUQ9H1K1 167 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 APOBEC3GQ9HC16 384 aaKnown RBP13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 SIX4Q9UIU6 781 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 TSKSQ9UJT2 592 aa13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 UBQLN1Q9UMX0 589 aaKnown RBP13.18□□□□□ -0.3
NEDD8-MDP1-203ENST00000604306 GUCA1BQ9UMX6 200 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms