RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 TTC26A0AVF1 554 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 HOXA2O43364 376 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 AKAP3O75969 853 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 IL18RAPO95256 599 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 EPB41P11171 864 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 ZNF18P17022 549 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 DNAJB1P25685 340 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 CTNNB1P35222 781 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 MATR3P43243 847 aaKnown RBP eCLIP12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 CYP2J2P51589 502 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 CLDN10P78369 228 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 SURF1Q15526 300 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 SMAD2Q15796 467 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 ENOX2Q16206 610 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 SLC10A6Q3KNW5 377 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 CDKAL1Q5VV42 579 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 AGMOQ6ZNB7 445 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 USP37Q86T82 979 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 IRF2BP1Q8IU81 584 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 FAM114A1Q8IWE2 563 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 CEP120Q8N960 986 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 ZNF689Q96CS4 500 aaPredicted RBP12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 SRRTQ9BXP5 876 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 PCIF1Q9H4Z3 704 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 RPF1Q9H9Y2 349 aaKnown RBP12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 CBX8Q9HC52 389 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 SNTG2Q9NY99 539 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 MUTYHQ9UIF7 546 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 NFE2L3Q9Y4A8 694 aa12.64□□□□□ -0.39
CHMP2A-207ENST00000600804 RECQL4O94761 1208 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 CSPG5O95196 566 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 ITGA4P13612 1032 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 KCNE1P15382 129 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 BMPR1AP36894 532 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 CASP4P49662 377 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 ACOT2P49753 483 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 YARSP54577 528 aaKnown RBP12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 CYP24A1Q07973 514 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 PSMD6Q15008 389 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 TPD52L1Q16890 204 aaPredicted RBP12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 ZBTB41Q5SVQ8 909 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 CBWD2Q8IUF1 395 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 FAM186BQ8IYM0 893 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 THNSL1Q8IYQ7 743 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 FIBCD1Q8N539 461 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 ZSWIM2Q8NEG5 633 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 CLP1Q92989 425 aaKnown RBP12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 SAAL1Q96ER3 474 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 SNX27Q96L92 541 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 FAM213AQ9BRX8 229 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 HSD3B7Q9H2F3 369 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 RBAKQ9NYW8 714 aaPredicted RBP12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 CNTN3Q9P232 1028 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 DERAQ9Y315 318 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 C2CD2Q9Y426 696 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 PCDHB7Q9Y5E2 793 aa12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 ZFHX2Q9C0A1 2572 aaPredicted RBP12.63□□□□□ -0.39
CHMP2A-207ENST00000600804 TDRD15B5MCY1 1934 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 LRRC10BA6NIK2 292 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 BECN2A8MW95 431 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 PMM2O15305 246 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 MEFVO15553 781 aaPredicted RBP12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 HARSP12081 509 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 EEF1GP26641 437 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 TNFSF9P41273 254 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 AP3M2P53677 418 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 PPP2R3AQ06190 1150 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 SPAG1Q07617 926 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 BFSP1Q12934 665 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 CEP135Q66GS9 1140 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 ADGRD2Q7Z7M1 963 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 RNF135Q8IUD6 432 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 AOPEPQ8N6M6 819 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 GSTCDQ8NEC7 633 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 PRSS33Q8NF86 280 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 MSLNLQ96KJ4 702 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 RNF39Q9H2S5 420 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 RSAD1Q9HA92 442 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 ALG13Q9NP73 1137 aaKnown RBP12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 RNF19AQ9NV58 838 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 KANSL3Q9P2N6 904 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 ARMCX3Q9UH62 379 aaPredicted RBP12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 HES2Q9Y543 173 aa12.62□□□□□ -0.39
CHMP2A-207ENST00000600804 DCHS1Q96JQ0 3298 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 GOLGA8IPA6NC78 632 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 GOLGA8JA6NMD2 632 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 OFD1O75665 1012 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 DGKIO75912 1065 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 RB1P06400 928 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 CXCL8P10145 99 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 CYP3A5P20815 502 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 GTF2H1P32780 548 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 ZBTB6Q15916 424 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 GLB1LQ6UWU2 654 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 WDR49Q8IV35 697 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 TRIM59Q8IWR1 403 aa12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 CNOT6LQ96LI5 555 aaKnown RBP12.61□□□□□ -0.39
CHMP2A-207ENST00000600804 TMEM117Q9H0C3 514 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms