RNA–Protein interactions for RNA: ENST00000598309.1

USHBP1-208, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-208ENST00000598309 TRIP11Q15643 1979 aa18.15■□□□□ 0.5
USHBP1-208ENST00000598309 ANKRD63C9JTQ0 380 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 TGM5O43548 720 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 XPOTO43592 962 aaKnown RBP18.14■□□□□ 0.49
USHBP1-208ENST00000598309 GCNT3O95395 438 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 LRPAP1P30533 357 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 POSTNQ15063 836 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 ZBTB6Q15916 424 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 ZBTB41Q5SVQ8 909 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 RESP18Q5W5W9 173 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 LILRA6Q6PI73 481 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 TMC5Q6UXY8 1006 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 ACCSQ96QU6 501 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 TRIM9Q9C026 710 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 MTRRQ9UBK8 725 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 TUBGCP4Q9UGJ1 667 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 UBQLN1Q9UMX0 589 aaKnown RBP18.14■□□□□ 0.49
USHBP1-208ENST00000598309 ZDHHC9Q9Y397 364 aa18.14■□□□□ 0.49
USHBP1-208ENST00000598309 SYN3O14994 580 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 RPL17P18621 184 aaKnown RBP18.13■□□□□ 0.49
USHBP1-208ENST00000598309 IGFBP6P24592 240 aaPredicted RBP18.13■□□□□ 0.49
USHBP1-208ENST00000598309 KRT85P78386 507 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 BECN1Q14457 450 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 ADALQ6DHV7 355 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 ANKS3Q6ZW76 656 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 PALB2Q86YC2 1186 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 KIF12Q96FN5 646 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 CLSTN3Q9BQT9 956 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 ZDHHC7Q9NXF8 308 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 TBC1D7Q9P0N9 293 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 FBXW11Q9UKB1 542 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 AGO2Q9UKV8 859 aaKnown RBP18.13■□□□□ 0.49
USHBP1-208ENST00000598309 USTQ9Y2C2 406 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 NUB1Q9Y5A7 615 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 ATP6V1DQ9Y5K8 247 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 BACE2Q9Y5Z0 518 aa18.13■□□□□ 0.49
USHBP1-208ENST00000598309 PDCD11Q14690 1871 aaKnown RBP18.13■□□□□ 0.49
USHBP1-208ENST00000598309 LACTBL1A8MY62 500 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 TISP43B9A030 160 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 WEE2P0C1S8 567 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 TKTP29401 623 aaKnown RBP18.12■□□□□ 0.49
USHBP1-208ENST00000598309 BRCC3P46736 316 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 CASP5P51878 434 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 RAB33AQ14088 237 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 KANK3Q6NY19 840 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 STXBP4Q6ZWJ1 553 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 GLYCTKQ8IVS8 523 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 STAMQ92783 540 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 SUSD3Q96L08 255 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 ASB7Q9H672 318 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 MUTYHQ9UIF7 546 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 DERAQ9Y315 318 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 PLXNA3P51805 1871 aa18.12■□□□□ 0.49
USHBP1-208ENST00000598309 VWA8A3KMH1 1905 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 I3L4J1 428 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 POLR2DO15514 142 aaKnown RBP18.11■□□□□ 0.49
USHBP1-208ENST00000598309 GPR37L1O60883 481 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 MYBP10242 640 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 ADSSP30520 456 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 KCNA1Q09470 495 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 TMEM31Q5JXX7 168 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 CCDC149Q6ZUS6 474 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 KREMEN2Q8NCW0 462 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 LEO1Q8WVC0 666 aaPredicted RBP18.11■□□□□ 0.49
USHBP1-208ENST00000598309 POMGNT1Q8WZA1 660 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 C7orf25Q9BPX7 421 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 FGFBP2Q9BYJ0 223 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 TMEM206Q9H813 350 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 C2CD2Q9Y426 696 aa18.11■□□□□ 0.49
USHBP1-208ENST00000598309 CCDC195A0A1B0GUA6 201 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 ZMYND10O75800 440 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 GARTP22102 1010 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 MCM4P33991 863 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 ACOT2P49753 483 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 ASIC1P78348 528 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 SPAG1Q07617 926 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 VARS2Q5ST30 1063 aaKnown RBP18.1■□□□□ 0.49
USHBP1-208ENST00000598309 LIN9Q5TKA1 542 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 SPATA1Q5VX52 437 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 RTL10Q7L3V2 364 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 SYCP3Q8IZU3 236 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 TDRD5Q8NAT2 981 aaKnown RBP18.1■□□□□ 0.49
USHBP1-208ENST00000598309 ZNF707Q96C28 371 aaPredicted RBP18.1■□□□□ 0.49
USHBP1-208ENST00000598309 SPATA32Q96LK8 384 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 C11orf16Q9NQ32 467 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 TSHZ2Q9NRE2 1034 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 KCNH3Q9ULD8 1083 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 C5orf42Q9H799 3197 aa18.1■□□□□ 0.49
USHBP1-208ENST00000598309 DENND4AQ7Z401 1863 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 C2CD4DB7Z1M9 353 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 H7C4K7 107 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 ADAM12O43184 909 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 RFPL2O75678 378 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 NFICP08651 508 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 POU2F2P09086 479 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 HNRNPA1P09651 372 aaKnown RBP eCLIP18.09■□□□□ 0.49
USHBP1-208ENST00000598309 SPATA31D3P0C874 917 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 PAX3P23760 479 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 HOXA9P31269 272 aa18.09■□□□□ 0.49
USHBP1-208ENST00000598309 AARSP49588 968 aaKnown RBP eCLIP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms