RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 STRN3Q13033 797 aa17.17■□□□□ 0.34
PSMC4-204ENST00000596386 NOLC1Q14978 699 aaKnown RBP eCLIP17.17■□□□□ 0.34
PSMC4-204ENST00000596386 PABPC1LQ4VXU2 614 aaKnown RBP17.17■□□□□ 0.34
PSMC4-204ENST00000596386 VARS2Q5ST30 1063 aaKnown RBP17.17■□□□□ 0.34
PSMC4-204ENST00000596386 SYT2Q8N9I0 419 aaPredicted RBP17.17■□□□□ 0.34
PSMC4-204ENST00000596386 TMX3Q96JJ7 454 aa17.17■□□□□ 0.34
PSMC4-204ENST00000596386 HCFC1R1Q9NWW0 138 aa17.17■□□□□ 0.34
PSMC4-204ENST00000596386 KCND2Q9NZV8 630 aa17.17■□□□□ 0.34
PSMC4-204ENST00000596386 ANKFY1Q9P2R3 1169 aa17.17■□□□□ 0.34
PSMC4-204ENST00000596386 DNMT3BQ9UBC3 853 aaKnown RBP17.17■□□□□ 0.34
PSMC4-204ENST00000596386 KCNG1Q9UIX4 513 aa17.17■□□□□ 0.34
PSMC4-204ENST00000596386 PDCD11Q14690 1871 aaKnown RBP17.16■□□□□ 0.34
PSMC4-204ENST00000596386 ZNF292O60281 2723 aa17.16■□□□□ 0.34
PSMC4-204ENST00000596386 SYN3O14994 580 aa17.16■□□□□ 0.34
PSMC4-204ENST00000596386 MAPTP10636 758 aaKnown RBP17.16■□□□□ 0.34
PSMC4-204ENST00000596386 GJB2P29033 226 aa17.16■□□□□ 0.34
PSMC4-204ENST00000596386 RPL9P32969 192 aaKnown RBP17.16■□□□□ 0.34
PSMC4-204ENST00000596386 SMTNP53814 917 aa17.16■□□□□ 0.34
PSMC4-204ENST00000596386 SLC12A3P55017 1021 aa17.16■□□□□ 0.34
PSMC4-204ENST00000596386 ARL6IP4Q66PJ3 421 aaKnown RBP17.16■□□□□ 0.34
PSMC4-204ENST00000596386 ZPBP2Q6X784 338 aa17.16■□□□□ 0.34
PSMC4-204ENST00000596386 NPAS3Q8IXF0 933 aa17.16■□□□□ 0.34
PSMC4-204ENST00000596386 ZNF461Q8TAF7 563 aa17.16■□□□□ 0.34
PSMC4-204ENST00000596386 NKD2Q969F2 451 aaPredicted RBP17.16■□□□□ 0.34
PSMC4-204ENST00000596386 C18orf25Q96B23 403 aaPredicted RBP17.16■□□□□ 0.34
PSMC4-204ENST00000596386 ZBTB45Q96K62 511 aaPredicted RBP17.16■□□□□ 0.34
PSMC4-204ENST00000596386 NUB1Q9Y5A7 615 aa17.16■□□□□ 0.34
PSMC4-204ENST00000596386 EP300Q09472 2414 aaPredicted RBP17.15■□□□□ 0.34
PSMC4-204ENST00000596386 ARHGEF37A1IGU5 675 aa17.15■□□□□ 0.34
PSMC4-204ENST00000596386 WDR27A2RRH5 827 aa17.15■□□□□ 0.34
PSMC4-204ENST00000596386 H3BQV1 296 aa17.15■□□□□ 0.34
PSMC4-204ENST00000596386 TBC1D4O60343 1298 aa17.15■□□□□ 0.34
PSMC4-204ENST00000596386 ABLIM3O94929 683 aa17.15■□□□□ 0.34
PSMC4-204ENST00000596386 CD2BP2O95400 341 aaKnown RBP17.15■□□□□ 0.34
PSMC4-204ENST00000596386 PLA2G4BP0C869 781 aa17.15■□□□□ 0.34
PSMC4-204ENST00000596386 GPC5P78333 572 aa17.15■□□□□ 0.34
PSMC4-204ENST00000596386 TMEM119Q4V9L6 283 aa17.15■□□□□ 0.34
PSMC4-204ENST00000596386 CDK5RAP3Q96JB5 506 aa17.15■□□□□ 0.34
PSMC4-204ENST00000596386 PLIN2Q99541 437 aa17.15■□□□□ 0.34
PSMC4-204ENST00000596386 DLGAP2Q9P1A6 1054 aa17.15■□□□□ 0.34
PSMC4-204ENST00000596386 H7C4K7 107 aa17.14■□□□□ 0.33
PSMC4-204ENST00000596386 RHOP08100 348 aa17.14■□□□□ 0.33
PSMC4-204ENST00000596386 ATF2P15336 505 aa17.14■□□□□ 0.33
PSMC4-204ENST00000596386 MCL1Q07820 350 aa17.14■□□□□ 0.33
PSMC4-204ENST00000596386 MRPL58Q14197 206 aaKnown RBP17.14■□□□□ 0.33
PSMC4-204ENST00000596386 SLC10A6Q3KNW5 377 aa17.14■□□□□ 0.33
PSMC4-204ENST00000596386 ING5Q8WYH8 240 aa17.14■□□□□ 0.33
PSMC4-204ENST00000596386 SHDQ96IW2 340 aa17.14■□□□□ 0.33
PSMC4-204ENST00000596386 SUSD3Q96L08 255 aa17.14■□□□□ 0.33
PSMC4-204ENST00000596386 AVENQ9NQS1 362 aaPredicted RBP17.14■□□□□ 0.33
PSMC4-204ENST00000596386 LARSQ9P2J5 1176 aaKnown RBP17.14■□□□□ 0.33
PSMC4-204ENST00000596386 FBXL5Q9UKA1 691 aa17.14■□□□□ 0.33
PSMC4-204ENST00000596386 MRPS23Q9Y3D9 190 aaKnown RBP17.14■□□□□ 0.33
PSMC4-204ENST00000596386 SIT1Q9Y3P8 196 aa17.14■□□□□ 0.33
PSMC4-204ENST00000596386 H0YCG3 227 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 PRRG1O14668 218 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 CLDN3O15551 220 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 LRG1P02750 347 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 CENPBP07199 599 aaPredicted RBP17.13■□□□□ 0.33
PSMC4-204ENST00000596386 DCNP07585 359 aaKnown RBP17.13■□□□□ 0.33
PSMC4-204ENST00000596386 ELF1P32519 619 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 MCM4P33991 863 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 NCKAP1LP55160 1127 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 STARD6P59095 220 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 CACNB1Q02641 598 aaPredicted RBP17.13■□□□□ 0.33
PSMC4-204ENST00000596386 SLC5A9Q2M3M2 681 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 SEZ6Q53EL9 994 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 SPECC1Q5M775 1068 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 TCEAL8Q8IYN2 117 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 PJA1Q8NG27 643 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 KCNN1Q92952 543 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 AK8Q96MA6 479 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 KXD1Q9BQD3 176 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 FOXQ1Q9C009 403 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 GDE1Q9NZC3 331 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 TUBGCP4Q9UGJ1 667 aa17.13■□□□□ 0.33
PSMC4-204ENST00000596386 NPHP3-ACAD11A0A0J9YXS1 232 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 SLC26A4O43511 780 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 CXCL8P10145 99 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 ARPP19P56211 112 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 PFKPQ01813 784 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 PRKCQQ04759 706 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 MLF2Q15773 248 aaPredicted RBP17.12■□□□□ 0.33
PSMC4-204ENST00000596386 CTXN3Q4LDR2 81 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 ARSHQ5FYA8 562 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 TPGS2Q68CL5 300 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 ZNF280DQ6N043 979 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 APPL2Q8NEU8 664 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 DDX12PQ92771 950 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 BICD1Q96G01 975 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 TBC1D32Q96NH3 1257 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 DDX23Q9BUQ8 820 aaKnown RBP17.12■□□□□ 0.33
PSMC4-204ENST00000596386 HAPLN2Q9GZV7 340 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 PLEKHA5Q9HAU0 1116 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 CYP4F11Q9HBI6 524 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 ODF2LQ9ULJ1 636 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 INSL5Q9Y5Q6 135 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 FRYLO94915 3013 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 CACNA1IQ9P0X4 2223 aa17.12■□□□□ 0.33
PSMC4-204ENST00000596386 ECI2O75521 394 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms